RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF17P17021 662 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 TMEM11P17152 192 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 HTR1EP28566 365 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 EIF1P41567 113 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 LHX2P50458 406 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 P2RX1P51575 399 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CCR4P51679 360 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 MVDP53602 400 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CLDN18P56856 261 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 EEFSECP57772 596 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 DSTNP60981 165 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF117Q03924 483 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 PIGFQ07326 219 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 FUT5Q11128 374 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CBFBQ13951 182 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 GNA13Q14344 377 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CDSNQ15517 529 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 HSPB2Q16082 182 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 BCL2A1Q16548 175 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 SYPL1Q16563 259 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 TMEM44Q2T9K0 475 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 PLPPR5Q32ZL2 321 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 NDUFAF6Q330K2 333 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 GTDC1Q4AE62 458 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 FBLN7Q53RD9 439 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 LRIF1Q5T3J3 769 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 RIPPLY2Q5TAB7 128 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 NSUN5P2Q63ZY6 315 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 TYW3Q6IPR3 259 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CBLN3Q6UW01 205 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 RBPMS2Q6ZRY4 209 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 EIF3MQ7L2H7 374 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 OLIG3Q7RTU3 272 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC46A3Q7Z3Q1 461 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 TMEM200AQ86VY9 491 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 LACC1Q8IV20 430 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CCDC71Q8IV32 467 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 GTPBP8Q8N3Z3 284 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 ANKFN1Q8N957 763 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 OR5W2Q8NH69 310 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 LILRB4Q8NHJ6 448 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 BCAS4Q8TDM0 211 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 OIT3Q8WWZ8 545 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 SMPDL3BQ92485 455 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CNOT9Q92600 299 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 RNFT2Q96EX2 444 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 AURKBQ96GD4 344 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 TXN2Q99757 166 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 TUBA1CQ9BQE3 449 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 RAD21L1Q9H4I0 556 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 MTHFD2LQ9H903 347 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CALHM2Q9HA72 323 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CHST11Q9NPF2 352 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC52A3Q9NQ40 469 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 MED17Q9NVC6 651 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 THUMPD1Q9NXG2 353 aaKnown RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 P2RX2Q9UBL9 471 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 KCNE5Q9UJ90 142 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 ICAM5Q9UMF0 924 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC45A2Q9UMX9 530 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC35A3Q9Y2D2 325 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 NDUFAF1Q9Y375 327 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF337Q9Y3M9 751 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 AP4B1Q9Y6B7 739 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 POLEQ07864 2286 aa5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 RP1L1Q8IWN7 2480 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P42-201ENST00000532126 CENPVL1A0A0U1RR11 272 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 AGAP5A6NIR3 686 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 EVPLLA8MZ36 301 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 KDM4EB2RXH2 506 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 C5orf58C9J3I9 102 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC33A1O00400 549 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 GSC2O15499 205 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 SEC14L5O43304 696 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 PAGE4O60829 102 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 TOXO94900 526 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 IL18BPO95998 194 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 BCHEP06276 602 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 DBIP07108 87 aaKnown RBP5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 CHRM4P08173 479 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 TFPTP0C1Z6 253 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 LINGO3P0C6S8 592 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 UBTFL6P0CB48 400 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 CD1EP15812 388 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 IL7RP16871 459 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 PPIBP23284 216 aaKnown RBP5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 ME2P23368 584 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 TIMP3P35625 211 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 ACAA2P42765 397 aaKnown RBP5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 PTTG1IPP53801 180 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 CRISP3P54108 245 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 CLDN20P56880 219 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 KCNJ10P78508 379 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 FOXF1Q12946 379 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 FADDQ13158 208 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 SKP2Q13309 424 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 NFYCQ13952 458 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 CCNIQ14094 377 aa5.18□□□□□ -1.58
HMGB1P42-201ENST00000532126 FGFBP1Q14512 234 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms