RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 ERVK-18Q9QC07 812 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 ICAM5Q9UMF0 924 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 CCDC88CQ9P219 2028 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 TEX13CA0A0J9YWL9 993 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 SNPHO15079 494 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 ZNF208O43345 1280 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 ZIC2O95409 532 aaPredicted RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 WDPCPO95876 746 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 MT-ND2P03891 347 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 MAKP20794 623 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 CRHBPP24387 322 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 TBC1D25Q3MII6 688 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 NXNL2Q5VZ03 156 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 MDGA2Q7Z553 956 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 COMMD2Q86X83 199 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 UBE2J2Q8N2K1 259 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 GPR137CQ8N3F9 429 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 OR6N2Q8NGY6 317 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 UFD1Q92890 307 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 SCNM1Q9BWG6 230 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 SLITRK2Q9H156 845 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 RPRD1BQ9NQG5 326 aaKnown RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 RSL24D1Q9UHA3 163 aaKnown RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 LAMP5Q9UJQ1 280 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 NOX1Q9Y5S8 564 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 FAM183AA6NL82 134 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 FARS2O95363 451 aaKnown RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 IGHG1P01857 330 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 HOXC12P31275 282 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 CD96P40200 585 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 TEKQ02763 1124 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 GLO1Q04760 184 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 MFAP5Q13361 173 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 EMC4Q5J8M3 183 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 CARD17Q5XLA6 110 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 KCTD18Q6PI47 426 aaPredicted RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 ARSKQ6UWY0 536 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 PLEKHG7Q6ZR37 379 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 MEPCEQ7L2J0 689 aaKnown RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 ERI1Q8IV48 349 aaKnown RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 ZNF441Q8N8Z8 693 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 THEM6Q8WUY1 208 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 HOXB13Q92826 284 aaPredicted RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 NMD3Q96D46 503 aaKnown RBP6.72□□□□□ -1.33
BDNF-214ENST00000530786 RACGAP1Q9H0H5 632 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 TRIM36Q9NQ86 728 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 UPB1Q9UBR1 384 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 SIGLEC7Q9Y286 467 aa6.72□□□□□ -1.33
BDNF-214ENST00000530786 CDK2AP1O14519 115 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 GPR171O14626 319 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 KHDRBS3O75525 346 aaKnown RBP6.71□□□□□ -1.33
BDNF-214ENST00000530786 MT-ND5P03915 603 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 MRPL3P09001 348 aaKnown RBP6.71□□□□□ -1.33
BDNF-214ENST00000530786 PRKACAP17612 351 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 S100A5P33763 92 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 TOMM34Q15785 309 aaPredicted RBP6.71□□□□□ -1.33
BDNF-214ENST00000530786 OCLNQ16625 522 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 ACSM5Q6NUN0 579 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 APOOLQ6UXV4 268 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 ZNF517Q6ZMY9 492 aaPredicted RBP6.71□□□□□ -1.33
BDNF-214ENST00000530786 SLC35D2Q76EJ3 337 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 P2RY8Q86VZ1 359 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 ZNF100Q8IYN0 542 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 FAM26EQ8N5C1 309 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 KBTBD8Q8NFY9 601 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 OR2M3Q8NG83 312 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 HGDQ93099 445 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 KTI12Q96EK9 354 aaPredicted RBP6.71□□□□□ -1.33
BDNF-214ENST00000530786 TMEM41AQ96HV5 264 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 CMC2Q9NRP2 79 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 C20orf141Q9NUB4 165 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 CAMK2AQ9UQM7 478 aa6.71□□□□□ -1.33
BDNF-214ENST00000530786 A0A1W2PNR3 127 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 A0A1W2PPL8 197 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 TMEM72A0PK05 275 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 LRRN3E7EW58 273 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 OIP5O43482 229 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 BCAS1O75363 584 aaPredicted RBP6.71□□□□□ -1.34
BDNF-214ENST00000530786 AKR7A3O95154 331 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 IGFBP1P08833 259 aaPredicted RBP6.71□□□□□ -1.34
BDNF-214ENST00000530786 MEOX1P50221 254 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 TAS2R43P59537 309 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 RAC1P63000 192 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 ZNF91Q05481 1191 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 RPL18Q07020 188 aaKnown RBP6.71□□□□□ -1.34
BDNF-214ENST00000530786 IL10RAQ13651 578 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 CRMP1Q14194 572 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 ZNF791Q3KP31 576 aaPredicted RBP6.71□□□□□ -1.34
BDNF-214ENST00000530786 KRT77Q7Z794 578 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 LNX2Q8N448 690 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 ARL6IP6Q8N6S5 226 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 PARPBPQ9NWS1 579 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 MRPL39Q9NYK5 338 aaKnown RBP6.71□□□□□ -1.34
BDNF-214ENST00000530786 AASSQ9UDR5 926 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 MOKQ9UQ07 419 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 RASD1Q9Y272 281 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 LRP4O75096 1905 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 DPPA5A6NC42 116 aa6.71□□□□□ -1.34
BDNF-214ENST00000530786 ANKRD33BA6NCL7 494 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms