RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CAPZA2P47755 286 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 EVX1P49640 407 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 SELENOPP49908 381 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 ROR2Q01974 943 aaKnown RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 GSTA3Q16772 222 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 AP1ARQ63HQ0 302 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 KRT80Q6KB66 452 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 NIPAL3Q6P499 406 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 RBMS3Q6XE24 437 aaKnown RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 LINC00114Q6XXX2 140 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 CREB3L2Q70SY1 520 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 C10orf107Q8IVU9 208 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 CLEC4FQ8N1N0 589 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 OR4A15Q8NGL6 344 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 MIPOL1Q8TD10 442 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 CNOT9Q92600 299 aaKnown RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 ANP32BQ92688 251 aaKnown RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 RAB8BQ92930 207 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 MRPL24Q96A35 216 aaKnown RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 ZNF416Q9BWM5 594 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 GATA5Q9BWX5 397 aaPredicted RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 LINC00470Q9BZP3 86 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 SEC61A2Q9H9S3 476 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 CRLF2Q9HC73 371 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 DDX28Q9NUL7 540 aaKnown RBP7.75□□□□□ -1.17
VPS11-203ENST00000529545 RASD1Q9Y272 281 aa7.75□□□□□ -1.17
VPS11-203ENST00000529545 PKD1L1Q8TDX9 2849 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 LOC105371242A0A075B767 164 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 A0A0G2JMP0 313 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 A0A0X1KG70 313 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 CFAP73A6NFT4 308 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 CLDN24A6NM45 220 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 TMEM233B4DJY2 109 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 FAAHO00519 579 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 UPK3AO75631 287 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 CHRM4P08173 479 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 CELA3BP08861 270 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 TCN1P20061 433 aaPredicted RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 UQCRC2P22695 453 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 NR4A1P22736 598 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 COL8A2P25067 703 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 FPR2P25090 351 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 ECHS1P30084 290 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 CHI3L1P36222 383 aaPredicted RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 COPZ1P61923 177 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 RPS23P62266 143 aaKnown RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 MRPS11P82912 194 aaKnown RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 ARF1P84077 181 aaKnown RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 MAD2L1Q13257 205 aaPredicted RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 PDCD2Q16342 344 aaPredicted RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 WHAMMP3Q1A5X7 153 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 TRMT5Q32P41 509 aaKnown RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 UGT3A2Q3SY77 523 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 ELFN2Q5R3F8 820 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 C6orf136Q5SQH8 315 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 GKAP1Q5VSY0 366 aaPredicted RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 PRAMEF8Q5VWM4 474 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 PRAMEF7Q5VXH5 474 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 OR4F3Q6IEY1 312 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 ACSM5Q6NUN0 579 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 TNFAIP8L2Q6P589 184 aaPredicted RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 FRRS1Q6ZNA5 592 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 HMGN2P46Q86SG4 172 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 RIMKLAQ8IXN7 391 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 GSPT2Q8IYD1 628 aaKnown RBP7.74□□□□□ -1.17
VPS11-203ENST00000529545 ZNF440Q8IYI8 595 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 CLECL1Q8IZS7 167 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 GPR137CQ8N3F9 429 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 VPS37AQ8NEZ2 397 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 OR4M2Q8NGB6 313 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 NANPQ8TBE9 248 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 MZB1Q8WU39 189 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 ZG16BQ96DA0 208 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 DPY30Q9C005 99 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 RACGAP1Q9H0H5 632 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 GRPEL1Q9HAV7 217 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 NTN4Q9HB63 628 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 NOX3Q9HBY0 568 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 GIMAP2Q9UG22 337 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 PRDM4Q9UKN5 801 aa7.74□□□□□ -1.17
VPS11-203ENST00000529545 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
VPS11-203ENST00000529545 A0A0G2JK05 382 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 A8MVM7 634 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 RPL36A-HNRNPH2H7BZ11 118 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 J3QLI3 93 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 RNASET2O00584 256 aaKnown RBP7.73□□□□□ -1.17
VPS11-203ENST00000529545 NPHS1O60500 1241 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 SLC43A1O75387 559 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 ZNF432O94892 652 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 MPZL1O95297 269 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 CPSF4O95639 269 aaKnown RBP7.73□□□□□ -1.17
VPS11-203ENST00000529545 HPXP02790 462 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 GSNP06396 782 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 CHRNGP07510 517 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 IGFBP1P08833 259 aaPredicted RBP7.73□□□□□ -1.17
VPS11-203ENST00000529545 IL7RP16871 459 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 ZNF43P17038 809 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 GTF2E2P29084 291 aaKnown RBP7.73□□□□□ -1.17
VPS11-203ENST00000529545 LSP1P33241 339 aa7.73□□□□□ -1.17
VPS11-203ENST00000529545 ANXA11P50995 505 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms