RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 NUFIP2Q7Z417 695 aaKnown RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SLC43A2Q8N370 569 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SLC25A43Q8WUT9 341 aaPredicted RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 C1orf159Q96HA4 380 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 REXO5Q96IC2 774 aaKnown RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 NR1H4Q96RI1 486 aaPredicted RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SLC39A3Q9BRY0 314 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SPATA9Q9BWV2 254 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM120AQ9BXJ8 343 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 OR11A1Q9GZK7 315 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 UBTD1Q9HAC8 227 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 BCO1Q9HAY6 547 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 GP6Q9HCN6 339 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 SAR1AQ9NR31 198 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 FGFR1OP2Q9NVK5 253 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 KLHL13Q9P2N7 655 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 CHRNA9Q9UGM1 479 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 LEF1Q9UJU2 399 aaPredicted RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF443Q9Y2A4 671 aaPredicted RBP7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TMED7Q9Y3B3 224 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TESMINQ9Y4I5 508 aa7.48□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM247A6NEH6 219 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF716A6NP11 495 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 C16orf97H3BN30 126 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 SULT2B1O00204 365 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 TMPRSS2O15393 492 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 TMCC2O75069 709 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 GCM2O75603 506 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 PMS2P2O95744 297 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 YES1P07947 543 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 IMPDH2P12268 514 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ETS2P15036 469 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ITGA2P17301 1181 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 CCNA2P20248 432 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 PPIBP23284 216 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 EDNRAP25101 427 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 FKBP2P26885 142 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 KCNJ5P48544 419 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 POLR2HP52434 150 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ATP5J2P56134 94 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 CSNK2A1P68400 391 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 H3F3AP84243 136 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 RASGEF1BQ0VAM2 473 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 SELPLGQ14242 412 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 KPNB1Q14974 876 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 LARS2Q15031 903 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 TAF11Q15544 211 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ETFDHQ16134 617 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ZSWIM7Q19AV6 140 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 EXOC3L2Q2M3D2 409 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF311Q5JNZ3 666 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM201Q5SNT2 666 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ABLIM2Q6H8Q1 611 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 TFAP2EQ6VUC0 442 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 STAC2Q6ZMT1 411 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 DNM1P46Q6ZS02 220 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 DHDDSQ86SQ9 333 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 MTDHQ86UE4 582 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 COMTD1Q86VU5 262 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF440Q8IYI8 595 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 GABRG1Q8N1C3 465 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 RFLNBQ8N5W9 214 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 NFKBIDQ8NI38 313 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 BBS10Q8TAM1 723 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 DNAJA3Q96EY1 480 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF300Q96RE9 604 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 ELAC2Q9BQ52 826 aaKnown RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 CPPED1Q9BRF8 314 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM38AQ9H6F2 299 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 DCLRE1BQ9H816 532 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 KLHL28Q9NXS3 571 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 NDUFA13Q9P0J0 144 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 KLHL14Q9P2G3 628 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 NDRG3Q9UGV2 375 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 LRCH1Q9Y2L9 728 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 IFT52Q9Y366 437 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 NDUFAF1Q9Y375 327 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 HDGFL3Q9Y3E1 203 aa7.47□□□□□ -1.21
SSBP3-212ENST00000528930 SPIN1Q9Y657 262 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-212ENST00000528930 A0A096LNT2 108 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ZC3H12DA2A288 527 aaKnown RBP7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF724A8MTY0 619 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 DEFB108AA8MXU0 73 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 EVPLLA8MZ36 301 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF814B7Z6K7 855 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 FBP2O00757 339 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ANGPT2O15123 496 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF208O43345 1280 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 FRS3O43559 492 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 TCF21O43680 179 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 TPST1O60507 370 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 RAMP1O60894 148 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 UBOX5O94941 541 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 THBDP07204 575 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 TFPIP10646 304 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 CRYGSP22914 178 aa7.46□□□□□ -1.22
SSBP3-212ENST00000528930 LOXP28300 417 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms