RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 IMPA2O14732 288 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 ARPC3O15145 178 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 TO15178 435 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 RNF13O43567 381 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 DLGAP3O95886 979 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 NGFRP08138 427 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 SBK2P0C263 348 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 OR2T7P0C7T2 308 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 APEHP13798 732 aaKnown RBP10.71□□□□□ -0.69
USF1-208ENST00000528768 LIFP15018 202 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 CELP19835 753 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 PTBP1P26599 531 aaKnown RBP eCLIP10.71□□□□□ -0.69
USF1-208ENST00000528768 CCR4P51679 360 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 HSF2Q03933 536 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 IL10RAQ13651 578 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 KCNAB1Q14722 419 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 NSDHLQ15738 373 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 NNATQ16517 81 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 ZNF791Q3KP31 576 aaPredicted RBP10.71□□□□□ -0.69
USF1-208ENST00000528768 PHF19Q5T6S3 580 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 AGAP7PQ5VUJ5 663 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 HIST2H2BCQ6DN03 193 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 TMEM71Q6P5X7 295 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 METAP1DQ6UB28 335 aaPredicted RBP10.71□□□□□ -0.69
USF1-208ENST00000528768 BTLAQ7Z6A9 289 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 OR8H2Q8N162 312 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 TEX19Q8NA77 164 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 ZNF485Q8NCK3 441 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 FAM71CQ8NEG0 241 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 OR52E2Q8NGJ4 325 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 OR2T27Q8NH04 317 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 OR4C3Q8NH37 302 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 HAVCR2Q8TDQ0 301 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 SMPDL3BQ92485 455 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 TM9SF4Q92544 642 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 C3orf49Q96BT1 292 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 EFHD2Q96C19 240 aaPredicted RBP10.71□□□□□ -0.69
USF1-208ENST00000528768 DDA1Q9BW61 102 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 TPK1Q9H3S4 243 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 MCCC2Q9HCC0 563 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 FGF21Q9NSA1 209 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 DTX4Q9Y2E6 619 aa10.71□□□□□ -0.69
USF1-208ENST00000528768 UNC13CQ8NB66 2214 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 CACNA1DQ01668 2161 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 CCDC182A6NF36 153 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 GABRPO00591 440 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 CTDSP2O14595 271 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 SLC19A2O60779 497 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 CLPSP04118 112 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 PGCP20142 388 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 PTNP21246 168 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 MYL9P24844 172 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 MTNR1BP49286 362 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 PSMD7P51665 324 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 GBX2P52951 348 aaPredicted RBP10.7□□□□□ -0.7
USF1-208ENST00000528768 PNLIPRP2P54317 469 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 NRG3P56975 720 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 FXYD6P3P58550 94 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 FABP5Q01469 135 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 PLAURQ03405 335 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 MXD1Q05195 221 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 SQSTM1Q13501 440 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 TRA2AQ13595 282 aaKnown RBP eCLIP10.7□□□□□ -0.7
USF1-208ENST00000528768 CRMP1Q14194 572 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 EMC4Q5J8M3 183 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 STEAP3Q658P3 488 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 XKRXQ6PP77 449 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 FAM131AQ6UXB0 335 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 THSD4Q6ZMP0 1018 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 JAZF1Q86VZ6 243 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 TPRA1Q86W33 373 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 EGFL6Q8IUX8 553 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 MS4A15Q8N5U1 240 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 SIRT6Q8N6T7 355 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 GDPD1Q8N9F7 314 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 PLPP5Q8NEB5 264 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 C17orf47Q8NEP4 570 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 OR5M3Q8NGP4 307 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 OR5W2Q8NH69 310 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 NEIL3Q8TAT5 605 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 ZNF721Q8TF20 911 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 LIPHQ8WWY8 451 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 PTP4A1Q93096 173 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 GAL3ST4Q96RP7 486 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 CNN2Q99439 309 aaKnown RBP10.7□□□□□ -0.7
USF1-208ENST00000528768 TMED9Q9BVK6 235 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 TBL1XR1Q9BZK7 514 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 NXF5Q9H1B4 397 aaKnown RBP10.7□□□□□ -0.7
USF1-208ENST00000528768 RERGLQ9H628 205 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 MED20Q9H944 212 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 CHRNA9Q9UGM1 479 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 TMEM184BQ9Y519 407 aaPredicted RBP10.7□□□□□ -0.7
USF1-208ENST00000528768 IER3IP1Q9Y5U9 82 aa10.7□□□□□ -0.7
USF1-208ENST00000528768 FABP12A6NFH5 140 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 A8MU76 341 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 H3BMH7 237 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 MKRN2OSH3BPM6 223 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 IGKV3-11P04433 115 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 ANKRD34CP0C6C1 535 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 FOLR1P15328 257 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms