RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 H1FNTQ75WM6 255 aaPredicted RBP29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 WDR31Q8NA23 367 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 TAMM41Q96BW9 452 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 PERPQ96FX8 193 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 MCHR1Q99705 422 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 LINC00470Q9BZP3 86 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 B3GAT1Q9P2W7 334 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 MAGED1Q9Y5V3 778 aaPredicted RBP29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 CAPN7Q9Y6W3 813 aa29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 SETD2Q9BYW2 2564 aaPredicted RBP29.01■■■□□ 2.23
SSSCA1-205ENST00000527920 M0R082 166 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 M0R3H8 397 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 DANCRP0C864 163 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF43P17038 809 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 CD247P20963 164 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 GRPRP30550 384 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 SNX32Q86XE0 403 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 PCYOX1LQ8NBM8 494 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 OR6T1Q8NGN1 323 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF417Q8TAU3 575 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 SLC41A3Q96GZ6 507 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF317Q96PQ6 595 aaPredicted RBP29■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF587Q96SQ5 575 aaPredicted RBP29■■■□□ 2.23
SSSCA1-205ENST00000527920 ECSITQ9BQ95 431 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 VPS13CQ709C8 3753 aa29■■■□□ 2.23
SSSCA1-205ENST00000527920 SHISA9B4DS77 424 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF587BE7ETH6 402 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 SELENOPP49908 381 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 RPS4XP62701 263 aaKnown RBP28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 VEZF1Q14119 521 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 SCAIQ8N9R8 606 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 ANKK1Q8NFD2 765 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 SMAP2Q8WU79 429 aaPredicted RBP28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 C10orf82Q8WW14 230 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 PCDHAC1Q9H158 963 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 OBP2BQ9NPH6 170 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 GID8Q9NWU2 228 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 SEC14L4Q9UDX3 406 aa28.99■■■□□ 2.23
SSSCA1-205ENST00000527920 ABCD4O14678 606 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 CHP2O43745 196 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 KRT33AO76009 404 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF432O94892 652 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 SF3A3Q12874 501 aaKnown RBP eCLIP28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 NPTX1Q15818 432 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 C9orf135Q5VTT2 229 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 NIPAL3Q6P499 406 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 ERICH5Q6P6B1 374 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 LINC00114Q6XXX2 140 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 YTHDF3Q7Z739 585 aaKnown RBP28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 RNF217Q8TC41 542 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 SLC26A7Q8TE54 656 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 NEUROG1Q92886 237 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 LAMP3Q9UQV4 416 aa28.98■■■□□ 2.23
SSSCA1-205ENST00000527920 USF3Q68DE3 2245 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 OVOL3O00110 214 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 CD40P25942 277 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 ZNF83P51522 516 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 CRYBA2P53672 197 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 KDM8Q8N371 416 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 C18orf12Q96KH6 178 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 GRIP2Q9C0E4 1043 aa28.97■■■□□ 2.23
SSSCA1-205ENST00000527920 LOC100653049A0A140TA62 436 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 KRT34O76011 436 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 BGLAPP02818 100 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 SOD3P08294 240 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 PAX7P23759 505 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 PRPS1P60891 318 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 C1DQ13901 141 aaKnown RBP28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 ENTPD8Q5MY95 495 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 FAIMQ9NVQ4 179 aa28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 CISD1Q9NZ45 108 aaKnown RBP28.96■■■□□ 2.23
SSSCA1-205ENST00000527920 A0A1W2PR80 420 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 AKAP8O43823 692 aaKnown RBP28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 MT-ATP6P00846 226 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 CDH11P55287 796 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 SH3BGRP55822 239 aaPredicted RBP28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 CLDN17P56750 224 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 PGGHGQ32M88 737 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 KLHL24Q6TFL4 600 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 OR4D11Q8NGI4 311 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 ADAMTS16Q8TE57 1224 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 ZNF583Q96ND8 569 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 ALKBH3Q96Q83 286 aaPredicted RBP28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 ASPNQ9BXN1 380 aa28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 MRPL39Q9NYK5 338 aaKnown RBP28.95■■■□□ 2.22
SSSCA1-205ENST00000527920 RPL36A-HNRNPH2H7BZ11 118 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 TRAF3IP2O43734 574 aaPredicted RBP28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 SLC43A1O75387 559 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 WNT11O96014 354 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 SLC25A3Q00325 362 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 LTBQ06643 244 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 DTX2Q86UW9 622 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 MAGEE2Q8TD90 523 aaPredicted RBP28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 MPP4Q96JB8 637 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 PLCE1Q9P212 2302 aa28.94■■■□□ 2.22
SSSCA1-205ENST00000527920 TRAPPC13A5PLN9 417 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 UPK3AO75631 287 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 LYPD3O95274 346 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 NQO1P15559 274 aaKnown RBP28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 LGALS3BPQ08380 585 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms