RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RBM45Q8IUH3 476 aaKnown RBP13.64□□□□□ -0.23
CAPN1-213ENST00000527897 OR6T1Q8NGN1 323 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 GTPBP3Q969Y2 492 aaKnown RBP13.64□□□□□ -0.23
CAPN1-213ENST00000527897 TAMM41Q96BW9 452 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 MUS81Q96NY9 551 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 EPYCQ99645 322 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 SH3GL1Q99961 368 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 ASPNQ9BXN1 380 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-213ENST00000527897 KLHL14Q9P2G3 628 aa13.64□□□□□ -0.23
CAPN1-213ENST00000527897 SETD2Q9BYW2 2564 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 A0A087WUJ7 227 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 BBIP1A8MTZ0 92 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SMAD7O15105 426 aaKnown RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SERPINI2O75830 405 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SOD3P08294 240 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 MDH1P40925 334 aaKnown RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 ATP5J2P56134 94 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 RIPPLY3P57055 190 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 NRF1Q16656 503 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 HIKESHIQ53FT3 197 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 ENTPD8Q5MY95 495 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 HMBOX1Q6NT76 420 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 H1FNTQ75WM6 255 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SSX8Q7RTT4 187 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 POU5F2Q8N7G0 328 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 WDR31Q8NA23 367 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 C1orf162Q8NEQ5 155 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 OXGR1Q96P68 337 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SMR3AQ99954 134 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 GSX2Q9BZM3 304 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 ALG2Q9H553 416 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 CCDC134Q9H6E4 229 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 EVA1AQ9H8M9 152 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 GID8Q9NWU2 228 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 CISD1Q9NZ45 108 aaKnown RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 USP22Q9UPT9 525 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 AMDHD2Q9Y303 409 aa13.63□□□□□ -0.23
CAPN1-213ENST00000527897 MAGED1Q9Y5V3 778 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-213ENST00000527897 SHISA9B4DS77 424 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 LRRN3E7EW58 273 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 H7C1Q1 480 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 FXYD1O00168 92 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 UPK3AO75631 287 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 C8BP07358 591 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 CD247P20963 164 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 CD40P25942 277 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 CDKN1AP38936 164 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 GZMMP51124 257 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 PRPS1P60891 318 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 SLC25A3Q00325 362 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 ROR2Q01974 943 aaKnown RBP13.62□□□□□ -0.23
CAPN1-213ENST00000527897 PMS2P3Q13401 168 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 NPTX1Q15818 432 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 CARD17Q5XLA6 110 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 ZNF613Q6PF04 617 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 Q71RC1 249 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-213ENST00000527897 UEVLDQ8IX04 471 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 DEPDC4Q8N2C3 294 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 OR8J3Q8NGG0 315 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 C10orf82Q8WW14 230 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 PROX1Q92786 737 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 RCN3Q96D15 328 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 RADILQ96JH8 1075 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 C18orf12Q96KH6 178 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 MOGAT1Q96PD6 335 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 AMBRA1Q9C0C7 1298 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 DLL4Q9NR61 685 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 B3GAT1Q9P2W7 334 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 SLC7A7Q9UM01 511 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 B3GALT5Q9Y2C3 310 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 SH3GLB1Q9Y371 365 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
CAPN1-213ENST00000527897 A0A096LPE4 126 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 TRIM64BA6NI03 449 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 OR6C65A6NJZ3 312 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 KPNA4O00629 521 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-213ENST00000527897 FMO6PO60774 539 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 SLC43A1O75387 559 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 WNT11O96014 354 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 BGLAPP02818 100 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 FOSL1P15407 271 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 TNFRSF1BP20333 461 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 AHCYP23526 432 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 PTAFRP25105 342 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 UBE2NP61088 152 aaKnown RBP13.61□□□□□ -0.23
CAPN1-213ENST00000527897 LTBQ06643 244 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 MFSD13AQ14CX5 517 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 PGGHGQ32M88 737 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 GPR137CQ8N3F9 429 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 C17orf78Q8N4C9 275 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 OR1K1Q8NGR3 316 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms