RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SLC41A2Q96JW4 573 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 NUDT9Q9BW91 350 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 RPRD1BQ9NQG5 326 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 WDR70Q9NW82 654 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 NLKQ9UBE8 527 aa13.98□□□□□ -0.17
USH1C-207ENST00000527720 DHCR7Q9UBM7 475 aaKnown RBP13.98□□□□□ -0.17
USH1C-207ENST00000527720 FER1L5A0AVI2 2057 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 UNC13CQ8NB66 2214 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 FAM172BPA6NC97 362 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 OR6C76A6NM76 312 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 MAGEB4O15481 346 aaPredicted RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 PRKNO60260 465 aaPredicted RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 TSPAN2O60636 221 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 CPNE3O75131 537 aaKnown RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 ICOSLGO75144 302 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 GLB1P16278 677 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 TACR3P29371 465 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 STARD6P59095 220 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 PITPNAQ00169 270 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 HSD17B12Q53GQ0 312 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 YIF1BQ5BJH7 314 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 GPR139Q6DWJ6 353 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 PRSS42Q7Z5A4 293 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 NANOGNBQ7Z5D8 188 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 LSM14AQ8ND56 463 aaKnown RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 UBASH3BQ8TF42 649 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 MNTQ99583 582 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 LPAR4Q99677 370 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 NUFIP1Q9UHK0 495 aaKnown RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 ALG1L2C9J202 215 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
USH1C-207ENST00000527720 UBL3O95164 117 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 PAHP00439 452 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 HIST1H2ABP04908 130 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 AHCYP23526 432 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 SLC6A1P30531 599 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 CSNK1EP49674 416 aaKnown RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 BTG1P62324 171 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 IFITM2Q01629 132 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 ZNF117Q03924 483 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 LTBQ06643 244 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 TIGD3Q6B0B8 471 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 HIST3H2AQ7L7L0 130 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 DNASE2BQ8WZ79 361 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 HIST1H2ACQ93077 130 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 SHDQ96IW2 340 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 OR14A2Q96R54 314 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 GAL3ST4Q96RP7 486 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 TP63Q9H3D4 680 aaPredicted RBP13.97□□□□□ -0.17
USH1C-207ENST00000527720 GRHPRQ9UBQ7 328 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 COPS7AQ9UBW8 275 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 SPATA2Q9UM82 520 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 ZNF281Q9Y2X9 895 aa13.97□□□□□ -0.17
USH1C-207ENST00000527720 PDCD5O14737 125 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 ATF1P18846 271 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 PNLIPRP2P54317 469 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 CFHR1Q03591 330 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 RPL18Q07020 188 aaKnown RBP13.96□□□□□ -0.17
USH1C-207ENST00000527720 SNAP47Q5SQN1 464 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 BICRALQ6AI39 1079 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 C9orf40Q8IXQ3 194 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 TCTE3Q8IZS6 198 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 OR1N1Q8NGS0 311 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 OR2T4Q8NH00 348 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 UPRTQ96BW1 309 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 ALG5Q9Y673 324 aa13.96□□□□□ -0.17
USH1C-207ENST00000527720 TMEM265A0A087WTH1 108 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 A0A1B0GX78 115 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 PGCP20142 388 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 MMP15P51511 669 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 GPR176Q14439 515 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 NSDHLQ15738 373 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 SLC29A4Q7RTT9 530 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 FAM220AQ7Z4H9 259 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 GHDCQ8N2G8 530 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 SPEM1Q8N4L4 309 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 KTI12Q96EK9 354 aaPredicted RBP13.95□□□□□ -0.18
USH1C-207ENST00000527720 PDCD1LG2Q9BQ51 273 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 FOXQ1Q9C009 403 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 WWTR1Q9GZV5 400 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 HCRTR2O43614 444 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 NDUFB5O43674 189 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 RENP00797 406 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 YES1P07947 543 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 SRMP19623 302 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 CXCR1P25024 350 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 HOXD12P35452 270 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 AFF3P51826 1226 aaKnown RBP13.95□□□□□ -0.18
USH1C-207ENST00000527720 ZP2Q05996 745 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 PLCXD2Q0VAA5 305 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 WDR74Q6RFH5 385 aaPredicted RBP13.95□□□□□ -0.18
USH1C-207ENST00000527720 TIGD4Q8IY51 512 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 PRR22Q8IZ63 422 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 ABHD1Q96SE0 405 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 RANGRFQ9HD47 186 aaPredicted RBP13.95□□□□□ -0.18
USH1C-207ENST00000527720 BRD7Q9NPI1 651 aa13.95□□□□□ -0.18
USH1C-207ENST00000527720 EXPH5Q8NEV8 1989 aa13.94□□□□□ -0.18
USH1C-207ENST00000527720 TRAV36DV7A0A075B6V5 113 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms