RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 IKZF2Q9UKS7 526 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 KCNS2Q9ULS6 477 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 PADI3Q9ULW8 664 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 PLAGL1Q9UM63 463 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 NPIPA1Q9UND3 350 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.95
COPB1-205ENST00000526527 PDE10AQ9Y233 779 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 POFUT2Q9Y2G5 429 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 KCNIP3Q9Y2W7 256 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 DHRS7Q9Y394 339 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 YIPF1Q9Y548 306 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 KPTNQ9Y664 436 aa2.84□□□□□ -1.95
COPB1-205ENST00000526527 MROH7-TTC4A0A0A0MT08 1334 aa2.84□□□□□ -1.96
COPB1-205ENST00000526527 RGPD1P0DJD0 1748 aa2.84□□□□□ -1.96
COPB1-205ENST00000526527 KDM6AO15550 1401 aaPredicted RBP2.84□□□□□ -1.96
COPB1-205ENST00000526527 TRAV26-1A0A087WT03 109 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 TEX13DA0A0J9YY54 714 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 ZCWPW2A0A1B0GU75 182 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 A0A1B0GVG6 124 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 A0A1B0GVY2 172 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MED19A0JLT2 244 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 SLC5A10A0PJK1 596 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MEX3AA1L020 520 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 FAM92AA1XBS5 289 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PPIAL4DF5H284 164 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 RNASEK-C17orf49H0YIS7 233 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 TMEM178BH3BS89 294 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 TMEM189-UBE2V1I3L0A0 370 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PSMD12O00232 456 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 RAB29O14966 203 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 XRCC2O43543 280 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 SYNGR3O43761 229 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 FGF17O60258 216 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PLIN3O60664 434 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CTNSO60931 367 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MED6O75586 246 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 DCTN3O75935 186 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 NXPH2O95156 264 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 STBD1O95210 358 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 ZWINTO95229 277 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CXCL14O95715 111 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 AP2A1O95782 977 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CST4P01036 141 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 C9P02748 559 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MELTFP08582 738 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CEACAM1P13688 526 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 GTF2F2P13984 249 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MYOD1P15172 320 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 DPEP1P16444 411 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PGAM1P18669 254 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 TSPAN8P19075 237 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CBLP22681 906 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CMA1P23946 247 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MMP11P24347 488 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 ELAVL4P26378 380 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 HLA-DMAP28067 261 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 SLC6A6P31641 620 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CDH5P33151 784 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 EPHX2P34913 555 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CA5AP35218 305 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PTGER4P35408 488 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 ACVR1BP36896 505 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 BTDP43251 543 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 UQCRFS1P47985 274 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 VEGFCP49767 419 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MEOX2P50222 304 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 IDH3GP51553 393 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 TPMTP51580 245 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CCR8P51685 355 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 NKX2-5P52952 324 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 DLX5P56178 289 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 VSX2P58304 361 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 MLF1P58340 268 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 RAB2AP61019 212 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 RPS18P62269 152 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 ERVK-25P63136 954 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 ELF3P78545 371 aaPredicted RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 ADARB1P78563 741 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 CCL7P80098 99 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 RPL19P84098 196 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 TFAMQ00059 246 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 CDK16Q00536 496 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 IRF8Q02556 426 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 FOLH1Q04609 750 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 TNFRSF9Q07011 255 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 CXCL9Q07325 125 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MGAT3Q09327 533 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 NME3Q13232 169 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 SELPLGQ14242 412 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MESDQ14696 234 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 POU6F1Q14863 301 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 MTF1Q14872 753 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 TRAM2Q15035 370 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PTGES3Q15185 160 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 EXT1Q16394 746 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 PHKG1Q16816 387 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 KNOP1Q1ED39 458 aaKnown RBP2.83□□□□□ -1.96
COPB1-205ENST00000526527 MRGPRG-AS1Q2M3A8 158 aa2.83□□□□□ -1.96
COPB1-205ENST00000526527 RFX4Q33E94 735 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms