RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 C5orf46Q6UWT4 87 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 H1FNTQ75WM6 255 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 OXGR1Q96P68 337 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 MOGAT1Q96PD6 335 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 PIP5K1AQ99755 562 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 EVA1AQ9H8M9 152 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 LAMP3Q9UQV4 416 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 SH3GLB1Q9Y371 365 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 DSCAMO60469 2012 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 MS4A18H0YCH9 400 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 ABCD4O14678 606 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 SLC22A2O15244 555 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 FMO6PO60774 539 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 CCDC22O60826 627 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 LYPD3O95274 346 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 HPRP00739 348 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 NQO1P15559 274 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 GYS2P54840 703 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 SLC25A3Q00325 362 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 SPOCK1Q08629 439 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 PMS2P3Q13401 168 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 MS4A18Q3C1V0 323 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 ZNF672Q499Z4 452 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 HIKESHIQ53FT3 197 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 Q5PR19 223 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 ZNF613Q6PF04 617 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 SPATA21Q7Z572 469 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 CARM1Q86X55 608 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 TREML1Q86YW5 311 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 RP9Q8TA86 221 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 ADAMTS16Q8TE57 1224 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 TMEM171Q8WVE6 324 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 PROX1Q92786 737 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 FBXW5Q969U6 566 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 ALKBH3Q96Q83 286 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 EPYCQ99645 322 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 SLC17A5Q9NRA2 495 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 CMTM6Q9NX76 183 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 SLC7A7Q9UM01 511 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 B3GALT5Q9Y2C3 310 aa11.27□□□□□ -0.61
TRAPPC4-205ENST00000525079 MAP1AP78559 2803 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 TRAPPC13A5PLN9 417 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 FAM220BPB1ANY3 271 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 SHISA9B4DS77 424 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 KPNA4O00629 521 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 ARHGEF9O43307 516 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 CHP2O43745 196 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 FZD7O75084 574 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 SERPINI2O75830 405 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 OR1E2P47887 323 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 PTH2RP49190 550 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 TGFBR3Q03167 851 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 VEZF1Q14119 521 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 LRRC23Q53EV4 343 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 SWT1Q5T5J6 900 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 CARD17Q5XLA6 110 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 ERICH5Q6P6B1 374 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 TTC33Q6PID6 262 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 KLHL17Q6TDP4 642 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 LINC00114Q6XXX2 140 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 DEF8Q6ZN54 512 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 UEVLDQ8IX04 471 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 MICU2Q8IYU8 434 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 OR2T12Q8NG77 320 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 SMAP2Q8WU79 429 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 RASSF5Q8WWW0 418 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 IGFBPL1Q8WX77 278 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 SLC41A3Q96GZ6 507 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 TMEM43Q9BTV4 400 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 EMC6Q9BV81 110 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 AMBRA1Q9C0C7 1298 aa11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 CISD1Q9NZ45 108 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-205ENST00000525079 A0A096LPE4 126 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 A0A1W2PPZ6 126 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 ELOVL7A1L3X0 281 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 ZNF587BE7ETH6 402 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 TRAF3IP2O43734 574 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 SLC43A1O75387 559 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 ZNF432O94892 652 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 CH25HO95992 272 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 SOD3P08294 240 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 AHCYP23526 432 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 CD40P25942 277 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 KDELR2P33947 212 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 CDH11P55287 796 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 PRPS1P60891 318 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 TUBA1BP68363 451 aa11.25□□□□□ -0.61
TRAPPC4-205ENST00000525079 TUBA4AP68366 448 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms