RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 FHL1Q13642 323 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 ZNF239Q16600 458 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 SLC43A2Q8N370 569 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 TMEM99Q8N816 258 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 OR8D4Q8NGM9 314 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 CYGBQ8WWM9 190 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 ZNF570Q96NI8 536 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 ADI1Q9BV57 179 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 IFT27Q9BW83 186 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 TSSK6Q9BXA6 273 aa14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 MCTS1Q9ULC4 181 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-213ENST00000524895 A0A1W2PNV4 684 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 SMAD9O15198 467 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 ATXN7O15265 892 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 SERPINI2O75830 405 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 TSPAN19P0C672 248 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 POLR2IP36954 125 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 AGFG1P52594 562 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 PTGES3Q15185 160 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 TMEM225Q6GV28 225 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 SLC27A4Q6P1M0 643 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 GFRALQ6UXV0 394 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 THSD4Q6ZMP0 1018 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 FGD2Q7Z6J4 655 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 GPAT4Q86UL3 456 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 IGFN1Q86VF2 1251 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 DHRSXQ8N5I4 330 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 IQCF1Q8N6M8 205 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 OR2T33Q8NG76 320 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 OR5M9Q8NGP3 310 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 UCN2Q96RP3 112 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 TUBA1CQ9BQE3 449 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 GRIP2Q9C0E4 1043 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 INIPQ9NRY2 104 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 FAM118AQ9NWS6 357 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 TAS2R5Q9NYW4 299 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 RASD1Q9Y272 281 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 MED12Q93074 2177 aa14.17□□□□□ -0.14
TSPAN4-213ENST00000524895 CLCA1A8K7I4 914 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 ZNF814B7Z6K7 855 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 MCIDASD6RGH6 385 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 PPP1R3DO95685 299 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 PLGP00747 810 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 F13BP05160 661 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 TPOP07202 933 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 EDN3P14138 238 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 ABOP16442 354 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 KLK2P20151 261 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 EPHA2P29317 976 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 P2RY4P51582 365 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 SMSP52788 366 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 H3F3AP84243 136 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 POU3F1Q03052 451 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 ZP4Q12836 540 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 GINS1Q14691 196 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 PON3Q15166 354 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 C6orf52Q5T4I8 152 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 TTC23Q5W5X9 447 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 DPY19L2P2Q6ZN68 376 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 Q6ZPB1 254 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 FCRLAQ7L513 359 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 CCDC103Q8IW40 242 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 CHERPQ8IWX8 916 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 KDM8Q8N371 416 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 ANKK1Q8NFD2 765 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 CPT1CQ8TCG5 803 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 ROBO4Q8WZ75 1007 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 GPX7Q96SL4 187 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 KATNB1Q9BVA0 655 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 TEX12Q9BXU0 123 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 POLDIP3Q9BY77 421 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 PRRG4Q9BZD6 226 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 ENKD1Q9H0I2 346 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 SLC25A19Q9HC21 320 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 PNPLA3Q9NST1 481 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 KLHL13Q9P2N7 655 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 GMPPBQ9Y5P6 360 aa14.16□□□□□ -0.14
TSPAN4-213ENST00000524895 SPENQ96T58 3664 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 LOC100130705A0A1B0GUX0 176 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 A0A1W2PRG6 482 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 SLC22A20A6NK97 555 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 ZAR1LA6NP61 321 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 H0YAE9 185 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 MS4A18H0YCH9 400 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 RAMP1O60894 148 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 VAMP5O95183 116 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 CAPGP40121 348 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 MLLT10P55197 1068 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 CTXN1P60606 82 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 RBPJQ06330 500 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 TOP3AQ13472 1001 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 C1DQ13901 141 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 SF3B4Q15427 424 aaKnown RBP eCLIP14.15□□□□□ -0.144e-7■■■■■ 33.9
TSPAN4-213ENST00000524895 PGGHGQ32M88 737 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 MS4A18Q3C1V0 323 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 TMEM236Q5W0B7 351 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 ABLIM2Q6H8Q1 611 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 ZNF585AQ6P3V2 769 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 PXKQ7Z7A4 578 aa14.15□□□□□ -0.14
TSPAN4-213ENST00000524895 UEVLDQ8IX04 471 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms