RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 C10orf53Q8N6V4 93 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 POMGNT2Q8NAT1 580 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 FAM156AQ8NDB6 213 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 OR5J2Q8NH18 312 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 TMEM239Q8WW34 195 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 KISS1RQ969F8 398 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-225ENST00000523950 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-225ENST00000523950 RAB3IPQ96QF0 476 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-225ENST00000523950 MED18Q9BUE0 208 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 ASB6Q9NWX5 421 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 PRSS50Q9UI38 385 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 MED31Q9Y3C7 131 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 ENPP4Q9Y6X5 453 aa11.11□□□□□ -0.63
VEGFA-225ENST00000523950 UTP20O75691 2785 aaKnown RBP11.11□□□□□ -0.63
VEGFA-225ENST00000523950 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ARPC2O15144 300 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ADAP00813 363 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 PRF1P14222 555 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 NQO1P15559 274 aaKnown RBP11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ITGA2P17301 1181 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 CRYGSP22914 178 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 LTBQ06643 244 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 PUDPQ08623 228 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 PMS2P3Q13401 168 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 SNTB1Q13884 538 aaKnown RBP11.1□□□□□ -0.63
VEGFA-225ENST00000523950 C1DQ13901 141 aaKnown RBP11.1□□□□□ -0.63
VEGFA-225ENST00000523950 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 RINLQ6ZS11 566 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 CXorf67Q86X51 503 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-225ENST00000523950 EPHX4Q8IUS5 362 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 P3H2Q8IVL5 708 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 NKAIN4Q8IVV8 208 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 UEVLDQ8IX04 471 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 UBE2J2Q8N2K1 259 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ZIC4Q8N9L1 334 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 LIPHQ8WWY8 451 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 PYURFQ96I23 114 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 WFIKKN1Q96NZ8 548 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 MOGAT1Q96PD6 335 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ZNF385AQ96PM9 386 aaKnown RBP11.1□□□□□ -0.63
VEGFA-225ENST00000523950 FNDC11Q9BVV2 318 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ACTR6Q9GZN1 396 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 SLCO5A1Q9H2Y9 848 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 NANSQ9NR45 359 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 TAS2R16Q9NYV7 291 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ACTR3BQ9P1U1 418 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 B3GAT1Q9P2W7 334 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 UPB1Q9UBR1 384 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 FAM32AQ9Y421 112 aaKnown RBP11.1□□□□□ -0.63
VEGFA-225ENST00000523950 NOX1Q9Y5S8 564 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ADGRG4Q8IZF6 3080 aa11.1□□□□□ -0.63
VEGFA-225ENST00000523950 ENO4A6NNW6 628 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 CTAG2O75638 210 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 UBOX5O94941 541 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 PRSS23O95084 383 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 OR6A2O95222 327 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 ASAH2BP0C7U1 165 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 RHCEP18577 417 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 IGHV1-2P23083 117 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 NTF4P34130 210 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 UGT2B15P54855 530 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 ZP4Q12836 540 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 FBXW10Q5XX13 1052 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 BHLHA15Q7RTS1 189 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-225ENST00000523950 PXKQ7Z7A4 578 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 P2RY8Q86VZ1 359 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 RNF113BQ8IZP6 322 aaKnown RBP11.09□□□□□ -0.63
VEGFA-225ENST00000523950 PIK3C3Q8NEB9 887 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 C1orf162Q8NEQ5 155 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-225ENST00000523950 ACOT11Q8WXI4 607 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-225ENST00000523950 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 MCUR1Q96AQ8 359 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 SGTBQ96EQ0 304 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 LINC00470Q9BZP3 86 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 MEPEQ9NQ76 525 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-225ENST00000523950 RASSF1Q9NS23 344 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 CACNA1DQ01668 2161 aa11.09□□□□□ -0.63
VEGFA-225ENST00000523950 MS4A18H0YCH9 400 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 PDLIM1O00151 329 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 KPNA4O00629 521 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-225ENST00000523950 PLPP3O14495 311 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 TRAF3IP2O43734 574 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-225ENST00000523950 OR7A10O76100 309 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 STAMBPO95630 424 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 CH25HO95992 272 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 UMPSP11172 480 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 PTNP21246 168 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 CBLP22681 906 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 EDNRAP25101 427 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 CLDN17P56750 224 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 IL1RL1Q01638 556 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 TGFBR3Q03167 851 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 FAPQ12884 760 aa11.08□□□□□ -0.64
VEGFA-225ENST00000523950 TRIM25Q14258 630 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms