RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 MICBQ29980 383 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 CCDC14Q49A88 953 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 XKR7Q5GH72 579 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF658Q5TYW1 1059 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 C1orf94Q6P1W5 598 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 RNASEKQ6P5S7 137 aaKnown RBP3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 TMEM107Q6UX40 140 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 HSD17B13Q7Z5P4 300 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 VRK2Q86Y07 508 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF584Q8IVC4 421 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 NUDCD3Q8IVD9 361 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 MTURNQ8N3F0 131 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 BBS5Q8N3I7 341 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR51S1Q8NGJ8 323 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 SERAC1Q96JX3 654 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 PLIN2Q99541 437 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 DEFB127Q9H1M4 99 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 THUMPD1Q9NXG2 353 aaKnown RBP3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 SLC2A8Q9NY64 477 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 BFARQ9NZS9 450 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 CLEC4EQ9ULY5 219 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 GRIN2AQ12879 1464 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 CDHR2Q9BYE9 1310 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 A0A0G2JLM5 398 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 A8MU10 97 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 MBTPS2O43462 519 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 UGT1A9O60656 530 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CIB2O75838 187 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 OXSR1O95747 527 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 IGHV2-5P01817 119 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CCDC166P0CW27 439 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CCDC130P13994 396 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CXCR2P25025 360 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 NTSP30990 170 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CASP14P31944 242 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 DIO3P55073 304 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 GTF3C1Q12789 2109 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 HSP90AB3PQ58FF7 597 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 EOGTQ5NDL2 527 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 C1orf146Q5VVC0 180 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CTRB2Q6GPI1 263 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 ZNF544Q6NX49 715 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 ARCQ7LC44 396 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 TTC5Q8N0Z6 440 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 FTMTQ8N4E7 242 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR9A1PQ8NGU1 263 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CMTM7Q96FZ5 175 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 TECTBQ96PL2 329 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 SH2D2AQ9NP31 389 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 INPP5EQ9NRR6 644 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 KLHL28Q9NXS3 571 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 CLCF1Q9UBD9 225 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 IKZF2Q9UKS7 526 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 STARD10Q9Y365 291 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 V9GY05 133 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 NUP160Q12769 1436 aa3.27□□□□□ -1.89
HMGB1P1-201ENST00000522557 PLEKHH1Q9ULM0 1364 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 ABCA10Q8WWZ4 1543 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 HEATR9A2RTY3 570 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 TCP11X1B4DZS4 312 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 GOLGA8SH3BPF8 625 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 KLHL41O60662 606 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 TSPAN13O95857 204 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 IGKV3-15P01624 115 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 KRT14P02533 472 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 MCF2P10911 925 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 TOP1P11387 765 aaKnown RBP3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 TBPP20226 339 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 NPBWR2P48146 333 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 SLC26A2P50443 739 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 P2RY4P51582 365 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 DLX1P56177 255 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 PRAMEF20Q5VT98 475 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 SASS6Q6UVJ0 657 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 SCARA5Q6ZMJ2 495 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR7G2Q8NG99 324 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 NEIL3Q8TAT5 605 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 TGS1Q96RS0 853 aaKnown RBP3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 ILKAPQ9H0C8 392 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 OR51J1Q9H342 316 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 RAB20Q9NX57 234 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 GIN1Q9NXP7 522 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 HOXC10Q9NYD6 342 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 WDR97A6NE52 1622 aa3.26□□□□□ -1.89
HMGB1P1-201ENST00000522557 TNIKQ9UKE5 1360 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 CEP170Q5SW79 1584 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 ERCC6L2Q5T890 1561 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 CUX1P39880 1505 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 PLB1Q6P1J6 1458 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 CCDC182A6NF36 153 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 A6NIZ1 184 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 E7ENQ6 273 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 ABCD4O14678 606 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 SNAPINO95295 136 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 AGTP01019 485 aa3.25□□□□□ -1.89
HMGB1P1-201ENST00000522557 P04436 131 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms