RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 LSM5Q9Y4Y9 91 aaKnown RBP12.79□□□□□ -0.36
SYNPO-205ENST00000522122 NPFFR2Q9Y5X5 522 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 A0A087WUU8 490 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 LRIT2A6NDA9 550 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 GGT3PA6NGU5 568 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 GJE1A6NN92 205 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 DSCR3O14972 297 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 TUBG1P23258 451 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 FXYD4P59646 89 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 Q499Y3 187 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 TANGO2Q6ICL3 276 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 CCDC71LQ8N9Z2 235 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 RRNAD1Q96FB5 475 aaKnown RBP12.79□□□□□ -0.36
SYNPO-205ENST00000522122 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 PLEK2Q9NYT0 353 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 CIB4A0PJX0 185 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM212A6NML5 194 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 EIF2S3P41091 472 aaKnown RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 AKR1C2P52895 323 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 SLC22A6Q4U2R8 563 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF585AQ6P3V2 769 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 PHYHIPQ92561 330 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 WDFY2Q96P53 400 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 FYTTD1Q96QD9 318 aaKnown RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 CHST8Q9H2A9 424 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 GALNT9Q9HCQ5 603 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 CAMK2AQ9UQM7 478 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 A0A1B0GV50 99 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 HMGN4O00479 90 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 DVL2O14641 736 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 TPT1P13693 172 aaKnown RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 PKLRP30613 574 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 OR14L1PQ8NHC6 308 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF649Q9BS31 505 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 A6NLC8 198 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 HRGP04196 525 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 IGFBP1P08833 259 aaPredicted RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 BAK1Q16611 211 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 LCN10Q6JVE6 187 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 DPY19L4Q7Z388 723 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 DUSP19Q8WTR2 217 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM43Q9BTV4 400 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 SLC25A19Q9HC21 320 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 SEMA4GQ9NTN9 838 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 RPH3AQ9Y2J0 694 aaPredicted RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF780AO75290 641 aaPredicted RBP12.78□□□□□ -0.36
SYNPO-205ENST00000522122 ZMAT1Q5H9K5 638 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 KRBOX4Q5JUW0 171 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 OR5M10Q6IEU7 315 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 PAQR6Q6TCH4 344 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 NKAIN4Q8IVV8 208 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 OR4M1Q8NGD0 313 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 OR14A2Q96R54 314 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 LMAN1LQ9HAT1 526 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
SYNPO-205ENST00000522122 CXorf51AA0A1B0GTR3 108 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 B8ZZF3 427 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 K7ESM1 405 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 NUPL2O15504 423 aaKnown RBP12.77□□□□□ -0.36
SYNPO-205ENST00000522122 TACR3P29371 465 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 OR1D4P47884 311 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 CAV2P51636 162 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 SELENOVP59797 346 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 C12orf73Q69YU5 71 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 SIAH3Q8IW03 269 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 OR51Q1Q8NH59 317 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 SPIN2AQ99865 258 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 SPIN2BQ9BPZ2 258 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 NOX4Q9NPH5 578 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 MIA3Q5JRA6 1907 aa12.77□□□□□ -0.36
SYNPO-205ENST00000522122 IFNA1P01562 189 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 OPCMLQ14982 345 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 ESCO2Q56NI9 601 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 ACSM5Q6NUN0 579 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 TCTE3Q8IZS6 198 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 TCTN2Q96GX1 697 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF593O00488 134 aaPredicted RBP12.77□□□□□ -0.37
SYNPO-205ENST00000522122 SLC35E2P0CK97 266 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
SYNPO-205ENST00000522122 MAT1AQ00266 395 aaKnown RBP12.77□□□□□ -0.37
SYNPO-205ENST00000522122 NDUFAF7Q7L592 441 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 SORCS2Q96PQ0 1159 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 PPA2Q9H2U2 334 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.77□□□□□ -0.37
SYNPO-205ENST00000522122 B3GALT1Q9Y5Z6 326 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 MICAL3Q7RTP6 2002 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 IGLV3-16A0A075B6K0 115 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 PXNP49023 591 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms