RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 HMGN1P05114 100 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 NOS3P29474 1203 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 CARD18P57730 90 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 CTXN1P60606 82 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 ERVK-25P63136 954 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 SRYQ05066 204 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 CD47Q08722 323 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 CTU2Q2VPK5 515 aaKnown RBP19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 SLC35F1Q5T1Q4 408 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 LNX2Q8N448 690 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 TMEM99Q8N816 258 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 LRRC75AQ8NAA5 344 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 OR2V1Q8NHB1 315 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 ERMAPQ96PL5 475 aaPredicted RBP19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 KATNB1Q9BVA0 655 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 PRRG3Q9BZD7 231 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 ZNF226Q9NYT6 803 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 AASSQ9UDR5 926 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 BAIAP2Q9UQB8 552 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 B3GALT5Q9Y2C3 310 aa19.17■□□□□ 0.66
R3HCC1-208ENST00000522012 NPIPA5E9PKD4 350 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 SERPINI2O75830 405 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 GRK5P34947 590 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 EIF1AXP47813 144 aaKnown RBP19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 PCYT1AP49585 367 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 INAQ16352 499 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 PDSS1Q5T2R2 415 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 KDM8Q8N371 416 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 TCEANCQ8N8B7 351 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 PNPLA2Q96AD5 504 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 PLEKHA8Q96JA3 519 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 IL4I1Q96RQ9 567 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 INIPQ9NRY2 104 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 NPIPA1Q9UND3 350 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 ADAM18Q9Y3Q7 739 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 TNRC6AQ8NDV7 1962 aaKnown RBP19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 DMXL2Q8TDJ6 3036 aa19.16■□□□□ 0.66
R3HCC1-208ENST00000522012 MS4A18H0YCH9 400 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CXCL13O43927 109 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 PRKYO43930 277 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 FZD7O75084 574 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 IGHG3P01860 377 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CD14P08571 375 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CLDN15P56746 228 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CLDN18P56856 261 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 PUDPQ08623 228 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 MAD2L1BPQ15013 274 aaPredicted RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 BCL2A1Q16548 175 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 MS4A18Q3C1V0 323 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 VASNQ6EMK4 673 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 C19orf48Q6RUI8 117 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 MEIOBQ8N635 442 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 OR10D3Q8NH80 312 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CNIH3Q8TBE1 160 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 ZHX1-C8orf76Q96EF9 292 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 ADGRG7Q96K78 797 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 GPX7Q96SL4 187 aaPredicted RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 NAA11Q9BSU3 229 aaPredicted RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 POLDIP3Q9BY77 421 aaKnown RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 SRXN1Q9BYN0 137 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 NRIP3Q9NQ35 241 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 SPRR3Q9UBC9 169 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 TNFRSF10DQ9UBN6 386 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 SURF4O15260 269 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 TLX2O43763 284 aaPredicted RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 MPZL2O60487 215 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 EIF1BO60739 113 aaKnown RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 SLC2A10O95528 541 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 PLGP00747 810 aaPredicted RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CRYABP02511 175 aaKnown RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 ZNF708P17019 499 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 KLK2P20151 261 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 RAC3P60763 192 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 ZP4Q12836 540 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CDK5R2Q13319 367 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 TOP3AQ13472 1001 aaPredicted RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 TMEM225Q6GV28 225 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 PAQR6Q6TCH4 344 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 SIAH3Q8IW03 269 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 RHOXF1Q8NHV9 184 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 TRUB1Q8WWH5 349 aaKnown RBP19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 TIGARQ9NQ88 270 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 PNPLA3Q9NST1 481 aa19.15■□□□□ 0.66
R3HCC1-208ENST00000522012 CNTRLQ7Z7A1 2325 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 IGHV3-15A0A0B4J1V0 119 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 AQP7P3A6NL99 342 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF814B7Z6K7 855 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 WISP2O76076 250 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 ARHGAP11AQ6P4F7 1023 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 UGT2A3Q6UWM9 527 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 CCDC103Q8IW40 242 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF786Q8N393 782 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 ADPRHL1Q8NDY3 354 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 OR8J1Q8NGP2 316 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 TIMP4Q99727 224 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 GRHPRQ9UBQ7 328 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 GPR52Q9Y2T5 361 aa19.14■□□□□ 0.65
R3HCC1-208ENST00000522012 LOC400499M0QZD8 3231 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 NCKAP5O14513 1909 aa19.13■□□□□ 0.65
R3HCC1-208ENST00000522012 RIIAD1A6NNX1 92 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms