RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 EXOGQ9Y2C4 368 aaKnown RBP10.36□□□□□ -0.75
CLK4-206ENST00000520878 RPH3AQ9Y2J0 694 aaPredicted RBP10.36□□□□□ -0.75
CLK4-206ENST00000520878 TRAV6A0A075B6T7 132 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 CENPXA8MT69 81 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 G3V3Y1 287 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 PTP4A3O75365 173 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 OR2T7P0C7T2 308 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 SFTPDP35247 375 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 MRPL28Q13084 256 aaKnown RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 EBPQ15125 230 aaKnown RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 GLYR1Q49A26 553 aaPredicted RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 AGAP7PQ5VUJ5 663 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 BICRALQ6AI39 1079 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 RDH10Q8IZV5 341 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 LSMEM1Q8N8F7 131 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 POMGNT2Q8NAT1 580 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 OR2T27Q8NH04 317 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 TAAR8Q969N4 342 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 DUSP23Q9BVJ7 150 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 C11orf54Q9H0W9 315 aaPredicted RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 PPP4R1LQ9P1A2 415 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 NCDNQ9UBB6 729 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 NPFFR2Q9Y5X5 522 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 HEATR5AQ86XA9 2040 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 TMED7-TICAM2A0A0A6YYA0 188 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ZNF823P16415 610 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 CAPZA2P47755 286 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 DCDP81605 110 aaKnown RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 TRIM61Q5EBN2 209 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 PWWP2BQ6NUJ5 590 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 KRT77Q7Z794 578 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 GLCCI1Q86VQ1 547 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 SLITRK4Q8IW52 837 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 MVB12AQ96EY5 273 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 KLHDC3Q9BQ90 382 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ULBP3Q9BZM4 244 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ERVMER34-1Q9H9K5 563 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 TMED7Q9Y3B3 224 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 A0A0G2JMP0 313 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 A0A0X1KG70 313 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 A0A1B0GTH9 108 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 IQCMA0A1B0GVH7 501 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ANKRD33BA6NCL7 494 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ANXA2P2A6NMY6 339 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 ANXA2P07355 339 aaKnown RBP10.35□□□□□ -0.75
CLK4-206ENST00000520878 SDHBP21912 280 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 EPHA4P54764 986 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 STARD6P59095 220 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 SNTA1Q13424 505 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 CBFBQ13951 182 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 COL28A1Q2UY09 1125 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 KLHL26Q53HC5 615 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 CARD17Q5XLA6 110 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 GRAMD2AQ8IUY3 354 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 C9orf40Q8IXQ3 194 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 OR4M2Q8NGB6 313 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 PCDH15Q96QU1 1955 aa10.35□□□□□ -0.75
CLK4-206ENST00000520878 NPIPA5E9PKD4 350 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 GDF9O60383 454 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TFP02787 698 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 CD3GP09693 182 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ELK1P19419 428 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 MAP2K3P46734 347 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 SLC6A8P48029 635 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 DIO1P49895 249 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 PLAURQ03405 335 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ZNF74Q16587 644 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 SLC25A35Q3KQZ1 300 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 VASNQ6EMK4 673 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 SFXN4Q6P4A7 337 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TMEM71Q6P5X7 295 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 LRFN4Q6PJG9 635 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 OGFOD3Q6PK18 319 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TMEM91Q6ZNR0 172 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 GDPD1Q8N9F7 314 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 OR1N1Q8NGS0 311 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 FRMD6Q96NE9 622 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ABCG5Q9H222 651 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 MIXL1Q9H2W2 232 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 NUFIP1Q9UHK0 495 aaKnown RBP10.34□□□□□ -0.75
CLK4-206ENST00000520878 NPIPA1Q9UND3 350 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 FRG2CA6NGY1 282 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ZNF879B4DU55 563 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ALOX12BO75342 701 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 DCAF7P61962 342 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 ZNF85Q03923 595 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 FZD5Q13467 585 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TBRG1Q3YBR2 411 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 KANSL1Q7Z3B3 1105 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 D2HGDHQ8N465 521 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 OR4K17Q8NGC6 315 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TMEM234Q8WY98 164 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 NXPE2Q96DL1 559 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 SRRQ9GZT4 340 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 COMMD4Q9H0A8 199 aa10.34□□□□□ -0.75
CLK4-206ENST00000520878 TSPAN10Q9H1Z9 355 aaPredicted RBP10.34□□□□□ -0.75
CLK4-206ENST00000520878 MMP25Q9NPA2 562 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms