RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 TIMM10BQ9Y5J6 103 aa5.8□□□□□ -1.48
LSM1-202ENST00000520286 SZT2Q5T011 3432 aa5.8□□□□□ -1.48
LSM1-202ENST00000520286 UBR2Q8IWV8 1755 aa5.8□□□□□ -1.48
LSM1-202ENST00000520286 A0A0C4DFX4 3053 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 ATAD5Q96QE3 1844 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 A0A1B0GVG6 124 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 E9PLD3 99 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 POU2F1P14859 743 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 NCK1P16333 377 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 NCF2P19878 526 aaPredicted RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 RPL23AP62750 156 aaKnown RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 C1orf61Q13536 156 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 CUL1Q13616 776 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 OR4F3Q6IEY1 312 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 TRPM8Q7Z2W7 1104 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 KIR3DL3Q8N743 410 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 AKR7LQ8NHP1 331 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 PPP1R14BQ96C90 147 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 LRRC45Q96CN5 670 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 ZBED3Q96IU2 234 aaPredicted RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 CITED1Q99966 193 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 FAM192AQ9GZU8 254 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 METTL7AQ9H8H3 244 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 TRMT112Q9UI30 125 aaKnown RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 ADAM28Q9UKQ2 775 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 RPL26L1Q9UNX3 145 aaKnown RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 SAMD4AQ9UPU9 718 aaKnown RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 SCML2Q9UQR0 700 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 PIGLQ9Y2B2 252 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 PRSS21Q9Y6M0 314 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 TRIOBPQ9H2D6 2365 aa5.79□□□□□ -1.48
LSM1-202ENST00000520286 MKI67P46013 3256 aaKnown RBP5.79□□□□□ -1.48
LSM1-202ENST00000520286 MYH10P35580 1976 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 MYH6P13533 1939 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 IGHV2-70DA0A0C4DH43 119 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 KLF18A0A0U1RQI7 1052 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 POLR2DO15514 142 aaKnown RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 ZNF253O75346 499 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 NOL4O94818 638 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 GJB5O95377 273 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 CLTAP09496 248 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 CCNB1P14635 433 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 IMPDH1P20839 514 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 SH3BGRP55822 239 aaPredicted RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 ATP5IP56385 69 aaPredicted RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 KCNJ2P63252 427 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 OC90Q02509 493 aaPredicted RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 TMED1Q13445 227 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 IMMTQ16891 758 aaKnown RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 SLC25A52Q3SY17 297 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 CFAP221Q4G0U5 840 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 SFT2D3Q587I9 215 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 RALGAPA1Q6GYQ0 2036 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 ZNF600Q6ZNG1 722 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 TPRA1Q86W33 373 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 ARHGAP18Q8N392 663 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 VN1R17PQ8TDU5 208 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 RASL10AQ92737 203 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 OPTNQ96CV9 577 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 SOSTQ9BQB4 213 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 IQCGQ9H095 443 aaKnown RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 GLT8D2Q9H1C3 349 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 DEFB129Q9H1M3 183 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 MCCC2Q9HCC0 563 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 ZNHIT6Q9NWK9 470 aaKnown RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 PAK1IP1Q9NWT1 392 aaPredicted RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 SEC14L3Q9UDX4 400 aa5.78□□□□□ -1.48
LSM1-202ENST00000520286 AK6Q9Y3D8 172 aaKnown RBP5.78□□□□□ -1.48
LSM1-202ENST00000520286 CUL9Q8IWT3 2517 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 A0A0U1RQS6 177 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 ARHGEF35A5YM69 484 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 FAM47DPA6NHR8 397 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 SIGLEC16A6NMB1 481 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 SNTNA6NMZ2 147 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 NBR2O15453 112 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 RS1O15537 224 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 PI15O43692 258 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 ECI2O75521 394 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 KRT16P08779 473 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 ZNF883P0CG24 379 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 CCDC166P0CW27 439 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 HSPD1P10809 573 aaKnown RBP5.77□□□□□ -1.49
LSM1-202ENST00000520286 BCL3P20749 454 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 CYP2B6P20813 491 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 CCT6AP40227 531 aaKnown RBP5.77□□□□□ -1.49
LSM1-202ENST00000520286 EFNB2P52799 333 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 IST1P53990 364 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 PRMT2P55345 433 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 SEC61GP60059 68 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 ERVPABLB-1P60509 514 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 TNFAIP8L3Q5GJ75 292 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 PDZK1Q5T2W1 519 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 TPGS2Q68CL5 300 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 COPS6Q7L5N1 327 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 NANOGNBQ7Z5D8 188 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 KRTAP7-1Q8IUC3 87 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 C9orf40Q8IXQ3 194 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 UBE2J2Q8N2K1 259 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 FGFRL1Q8N441 504 aa5.77□□□□□ -1.49
LSM1-202ENST00000520286 RNF10Q8N5U6 811 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms