RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 STK35Q8TDR2 534 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 SLC35B4Q969S0 331 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 TMEM19Q96HH6 336 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 FOXN4Q96NZ1 517 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 SPATA9Q9BWV2 254 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 RSPO3Q9BXY4 272 aaPredicted RBP10.23□□□□□ -0.77
POLB-208ENST00000520008 BPESC1Q9GZL8 116 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 ZNF442Q9H7R0 627 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 TPT1P8Q9HAU6 139 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 MOV10Q9HCE1 1003 aaKnown RBP10.23□□□□□ -0.77
POLB-208ENST00000520008 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 KCNS2Q9ULS6 477 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 RCE1Q9Y256 329 aa10.23□□□□□ -0.77
POLB-208ENST00000520008 A0A096LPE4 126 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 A0A0G2JPF8 293 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 LOC100289279A0A1B0GTE1 492 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 A0A1W2PPZ6 126 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 HNRNPCL2B2RXH8 293 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 HNRNPCL3B7ZW38 293 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 HNRNPCL1O60812 293 aaKnown RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 CELA3BP08861 270 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 HNRNPCL4P0DMR1 293 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 BMP2P12643 396 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 APEHP13798 732 aaKnown RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 IDO1P14902 403 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 HOXB9P17482 250 aaPredicted RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 GIFP27352 417 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 IDH3GP51553 393 aaPredicted RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 WDR4P57081 412 aaKnown RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 UBE2NP61088 152 aaKnown RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 HGFACQ04756 655 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 LARS2Q15031 903 aaKnown RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 MSANTD1Q6ZTZ1 278 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 SLC46A3Q7Z3Q1 461 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 MAVSQ7Z434 540 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 OR4F15Q8NGB8 312 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 ZBTB18Q99592 522 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 C19orf24Q9BVV8 132 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 CHODLQ9H9P2 273 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 BCL2L10Q9HD36 194 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 SDR39U1Q9NRG7 319 aaPredicted RBP10.22□□□□□ -0.77
POLB-208ENST00000520008 BOLA1Q9Y3E2 137 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 NBEAL1Q6ZS30 2694 aa10.22□□□□□ -0.77
POLB-208ENST00000520008 TMEM129A0AVI4 362 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 TRPC5OSA6NMA1 111 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 SLC22A3O75751 556 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 KRT33AO76009 404 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 AHSA1O95433 338 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 STAMBPO95630 424 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 TACSTD2P09758 323 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 NUDT7P0C024 238 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 CBR1P16152 277 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 CRATP43155 626 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 RPS5P46782 204 aaKnown RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 CLDN17P56750 224 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 SRSF2Q01130 221 aaKnown RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 ROR2Q01974 943 aaKnown RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 TMEM123Q8N131 208 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 KDM8Q8N371 416 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 ZNF540Q8NDQ6 660 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 TRIM44Q96DX7 344 aaPredicted RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 KTI12Q96EK9 354 aaPredicted RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 DOK1Q99704 481 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 VRK1Q99986 396 aaPredicted RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 KCNS3Q9BQ31 491 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 C12orf10Q9HB07 376 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 THAP1Q9NVV9 213 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 THUMPD1Q9NXG2 353 aaKnown RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 ZIM2Q9NZV7 527 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 FBXO9Q9UK97 447 aaPredicted RBP10.21□□□□□ -0.77
POLB-208ENST00000520008 IFT52Q9Y366 437 aa10.21□□□□□ -0.77
POLB-208ENST00000520008 IGKV1D-42A0A075B6H8 117 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 IGHV2OR16-5A0A0B4J2B6 119 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 LOC102725191A0A1B0GVB3 256 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 TRAF3IP2O43734 574 aaPredicted RBP10.2□□□□□ -0.78
POLB-208ENST00000520008 LILRA1O75019 489 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 NCF2P19878 526 aaPredicted RBP10.2□□□□□ -0.78
POLB-208ENST00000520008 IL2RGP31785 369 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 THBS4P35443 961 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 ARF1P84077 181 aaKnown RBP10.2□□□□□ -0.78
POLB-208ENST00000520008 HOXC5Q00444 222 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 POU3F1Q03052 451 aaPredicted RBP10.2□□□□□ -0.78
POLB-208ENST00000520008 RGNQ15493 299 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 SLC9B1Q4ZJI4 515 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 ZNF311Q5JNZ3 666 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 CEP85LQ5SZL2 805 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 FAM69AQ5T7M9 428 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 COMTD1Q86VU5 262 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 LSMEM1Q8N8F7 131 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 OR9I1Q8NGQ6 314 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 GTF2H4Q92759 462 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 C1orf159Q96HA4 380 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 ZNF75AQ96N20 296 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 OXGR1Q96P68 337 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 PAIP1Q9H074 479 aaKnown RBP10.2□□□□□ -0.78
POLB-208ENST00000520008 GPR35Q9HC97 309 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 KCNK9Q9NPC2 374 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 A4GALTQ9NPC4 353 aa10.2□□□□□ -0.78
POLB-208ENST00000520008 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms