RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RCE1Q9Y256 329 aa5.5□□□□□ -1.53
CTNNA1-216ENST00000519489 STK16O75716 305 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 BCAS2O75934 225 aaPredicted RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 BPNT1O95861 308 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 PF4P02776 101 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 CCDC175P0C221 793 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 OR8G3PP0DMU2 310 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 PF4V1P10720 104 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 UQCRC2P22695 453 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 PTX3P26022 381 aaPredicted RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 GABRA3P34903 492 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 CTNNA1P35221 906 aaKnown RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 ARR3P36575 388 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 MAP3K8P41279 467 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 SELENOPP49908 381 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 CUL3Q13618 768 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 RBMY1FQ15415 496 aaKnown RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 TGFBIQ15582 683 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 ERCC6LQ2NKX8 1250 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 STEAP4Q687X5 459 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 GRHL2Q6ISB3 625 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 DDIASQ8IXT1 998 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 KLHL36Q8N4N3 616 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 OR2T6Q8NHC8 308 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 LHX4Q969G2 390 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 TMEM45BQ96B21 275 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 ERP27Q96DN0 273 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 DDOQ99489 341 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 TM2D3Q9BRN9 247 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 LMF2Q9BU23 707 aaKnown RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 MRPL1Q9BYD6 325 aaKnown RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 TRIM15Q9C019 465 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 OR11A1Q9GZK7 315 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 NMUR2Q9GZQ4 415 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 C20orf96Q9NUD7 363 aaPredicted RBP5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 DECR2Q9NUI1 292 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 RNF14Q9UBS8 474 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 CARD8Q9Y2G2 431 aa5.49□□□□□ -1.53
CTNNA1-216ENST00000519489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.49□□□□□ -1.536e-6■■□□□ 13.3
CTNNA1-216ENST00000519489 ZSCAN5BA6NJL1 495 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 UPK1AO00322 258 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 TPD52L2O43399 206 aaKnown RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 SPRY3O43610 288 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 CCNT2O60583 730 aaKnown RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF205O95201 554 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 HLA-HP01893 362 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 LTA4HP09960 611 aaKnown RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF250P15622 560 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF37AP17032 561 aaPredicted RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 SLC29A2Q14542 456 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 QPRTQ15274 297 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 TIGD2Q4W5G0 525 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 SYT14P1Q58G82 188 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 C11orf63Q6NUN7 778 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 KLBQ86Z14 1044 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF584Q8IVC4 421 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 VSTM4Q8IW00 320 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ZBED8Q8IZ13 594 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 SPICQ8N5J4 248 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 TMCO5AQ8N6Q1 288 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 POMGNT2Q8NAT1 580 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 OR4C13Q8NGP0 309 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 PIGXQ8TBF5 258 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 C17orf50Q8WW18 174 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 DPF1Q92782 380 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 MAELQ96JY0 434 aaKnown RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 GPR78Q96P69 363 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 OR5M11Q96RB7 305 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ASPNQ9BXN1 380 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 FRMD8P1Q9BZ68 369 aaPredicted RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 SIRPDQ9H106 197 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 TAS2R9Q9NYW1 312 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF224Q9NZL3 707 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 C19orf53Q9UNZ5 99 aaPredicted RBP5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 SLC9A8Q9Y2E8 581 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 LRCH1Q9Y2L9 728 aa5.48□□□□□ -1.53
CTNNA1-216ENST00000519489 P2RY10O00398 339 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 SLC25A17O43808 307 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 MT-ND5P03915 603 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 IMPDH2P12268 514 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF26P17031 533 aaPredicted RBP5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 PAX6P26367 422 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 SERPINB1P30740 379 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 ALDH9A1P49189 494 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 MMP15P51511 669 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 LUMP51884 338 aaPredicted RBP5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 TERF1P54274 439 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 DLX1P56177 255 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 LINC00310P59036 64 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 BTG1P62324 171 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 GALNT1Q10472 559 aaPredicted RBP5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 RASA2Q15283 850 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 OR4D1Q15615 310 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 LY6EQ16553 131 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 TMEM95Q3KNT9 176 aa5.47□□□□□ -1.53
CTNNA1-216ENST00000519489 CCNYL2Q5T2Q4 361 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms