RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 PIGXQ8TBF5 258 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 RSRC1Q96IZ7 334 aaKnown RBP16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 LAT2Q9GZY6 243 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 SLC25A37Q9NYZ2 338 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 AMDHD2Q9Y303 409 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 SPIN1Q9Y657 262 aaPredicted RBP16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 TRBV5-3A0A0A0MS03 114 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 SERINC4A6NH21 518 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 ZNF716A6NP11 495 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 EVPLLA8MZ36 301 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 GSNP06396 782 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 CDKN2CP42773 168 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 TP53BP2Q13625 1128 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 SELPLGQ14242 412 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 CARTPTQ16568 116 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 SWI5Q1ZZU3 235 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 SPDYE7PQ495Y7 208 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 GTDC1Q4AE62 458 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 PDZK1Q5T2W1 519 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 SPATA24Q86W54 205 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 MSRB3Q8IXL7 192 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 CLECL1Q8IZS7 167 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 C17orf78Q8N4C9 275 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 WDR31Q8NA23 367 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 C1orf162Q8NEQ5 155 aaPredicted RBP16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 OR4A15Q8NGL6 344 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 FBXO17Q96EF6 278 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 FOXN4Q96NZ1 517 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 CPPED1Q9BRF8 314 aaPredicted RBP16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 NKX1-2Q9UD57 310 aaPredicted RBP16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 KCNE3Q9Y6H6 103 aa16.6■□□□□ 0.25
CTNNA1-213ENST00000519113 IGHV4-61A0A0C4DH41 118 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 GMNNO75496 209 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 CYP7B1O75881 506 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 ITGA5P08648 1049 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 TFPIP10646 304 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 ZNF23P17027 643 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 PGCP20142 388 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 SLC16A1P53985 500 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 SNRPD2P62316 118 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 TGFBR3Q03167 851 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 SKP2Q13309 424 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 MST1LQ2TV78 715 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 CR1LQ2VPA4 569 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 ZFP1Q6P2D0 407 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 PSMA8Q8TAA3 256 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 PYDC1Q8WXC3 89 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 OR5P2Q8WZ92 322 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 SORCS2Q96PQ0 1159 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 SLC17A5Q9NRA2 495 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 ACER3Q9NUN7 267 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 GPATCH2Q9NW75 528 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 GMPR2Q9P2T1 348 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 UPB1Q9UBR1 384 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 SNX13Q9Y5W8 968 aa16.59■□□□□ 0.25
CTNNA1-213ENST00000519113 GSTA4O15217 222 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 DNPH1O43598 174 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 PMS2P2O95744 297 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 BAG2O95816 211 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 ZCCHC18P0CG32 403 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 HOXB9P17482 250 aaPredicted RBP16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 PPIBP23284 216 aaKnown RBP16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 FKBP2P26885 142 aaKnown RBP16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 NTF4P34130 210 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 APOBEC1P41238 236 aaKnown RBP16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 MAGEA8P43361 318 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 FOXG1P55316 489 aaPredicted RBP16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 SLC34A1Q06495 639 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 MEX3DQ86XN8 651 aaKnown RBP16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 OR10A6Q8NH74 314 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 MOAP1Q96BY2 351 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 SDF2Q99470 211 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 PIF1Q9H611 641 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 SLC6A13Q9NSD5 602 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 PARPBPQ9NWS1 579 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 ACTR3BQ9P1U1 418 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 EGFL7Q9UHF1 273 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 CORO2BQ9UQ03 480 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 HDGFL3Q9Y3E1 203 aa16.58■□□□□ 0.24
CTNNA1-213ENST00000519113 AQP12BA6NM10 295 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 ATP6V1G2-DDX39BF2Z307 99 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 PDLIM1O00151 329 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 CLIC1O00299 241 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 WIPF1O43516 503 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 C6orf47O95873 294 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 WNT11O96014 354 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 CSTAP01040 98 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 ANPEPP15144 967 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 PRPS1P60891 318 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 ZNF141Q15928 474 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 BHLHB9Q6PI77 547 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 KLHL24Q6TFL4 600 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 CASP12Q6UXS9 341 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 CYP2R1Q6VVX0 501 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 C12orf54Q6X4T0 127 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 EIF3MQ7L2H7 374 aaKnown RBP16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 AQP12AQ8IXF9 295 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 TRIML2Q8N7C3 387 aa16.57■□□□□ 0.24
CTNNA1-213ENST00000519113 OR2T12Q8NG77 320 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms