RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ASB8Q9H765 288 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ATP13A3Q9H7F0 1226 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ADGRL4Q9HBW9 690 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 EML4Q9HC35 981 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF334Q9HCZ1 680 aaPredicted RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACP6Q9NPH0 428 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 FKBP14Q9NWM8 211 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 ELOVL5Q9NYP7 299 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 SEC14L4Q9UDX3 406 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 MRPS28Q9Y2Q9 187 aaKnown RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRG3Q9Y2Y8 225 aaPredicted RBP3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 FADS3Q9Y5Q0 445 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 MAP3K15Q6ZN16 1313 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 TTC21AQ8NDW8 1320 aa3.38□□□□□ -1.87
RNU4-60P-201ENST00000517239 IGLV5-52A0A0A0MRZ9 124 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 MYMKA6NI61 221 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOLGA6L10A6NI86 522 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5B21A6NL26 309 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SMIM23A6NLE4 172 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOLGA8JA6NMD2 632 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 IDSB3KWA1 339 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 TRDCB7Z8K6 153 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOLGA8KD6RF30 607 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SULT1C2O00338 296 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRMT5O14744 637 aaPredicted RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC9A3R1O14745 358 aaPredicted RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 TNFSF11O14788 317 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SGCEO43556 437 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 UGT2B17O75795 530 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 PMS2P2O95744 297 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 GP1BAP07359 652 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SERPINA6P08185 405 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 FRMD6-AS1P0C7T7 363 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 PSKH1P11801 424 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CALML3P27482 149 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CALCRP30988 508 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 FGF9P31371 208 aaPredicted RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 FOXN2P32314 431 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 VHLP40337 213 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CSNK1DP48730 415 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ERVK11-1P61568 191 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 VSNL1P62760 191 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPS27AP62979 156 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 REEP5Q00765 189 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 GLO1Q04760 184 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ARL16Q0P5N6 197 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 GPR17Q13304 367 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5I1Q13606 314 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SF3A2Q15428 464 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR4D1Q15615 310 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ATP6V1FQ16864 119 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF672Q499Z4 452 aaPredicted RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 TTMPQ5BVD1 217 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 DCST2Q5T1A1 773 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SEL1L2Q5TEA6 688 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 APOOLQ6UXV4 268 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 STAC2Q6ZMT1 411 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF782Q6ZMW2 699 aaPredicted RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC25A48Q6ZT89 311 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 LINC00336Q6ZUF6 198 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 MOB2Q70IA6 237 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 NUFIP2Q7Z417 695 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 IFNEQ86WN2 208 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF677Q86XU0 584 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC22A15Q8IZD6 547 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMEM151AQ8N4L1 468 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CCDC112Q8NEF3 446 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR6K2Q8NGY2 324 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR6F1Q8NGZ6 308 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 TRUB1Q8WWH5 349 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 NDRG1Q92597 394 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPEQ96AT9 228 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 OPTNQ96CV9 577 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CELF6Q96J87 481 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 PPP1R36Q96LQ0 422 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF670Q9BS34 389 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 COPS4Q9BT78 406 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CABLES2Q9BTV7 478 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CHRNA10Q9GZZ6 450 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 CENPHQ9H3R5 247 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 RBKSQ9H477 322 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 RNF41Q9H4P4 317 aaPredicted RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ARMC7Q9H6L4 198 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 PLEKHA1Q9HB21 404 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 PATZ1Q9HBE1 687 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 INTS9Q9NV88 658 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 USE1Q9NZ43 259 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 WARS2Q9UGM6 360 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 COPS3Q9UNS2 423 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 ERVW-1Q9UQF0 538 aa3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 RCL1Q9Y2P8 373 aaKnown RBP3.37□□□□□ -1.87
RNU4-60P-201ENST00000517239 SMCHD1A6NHR9 2005 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAM181BA6NEQ2 426 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 TVP23AA6NH52 213 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 VSTM2BA6NLU5 285 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 K7EN84 100 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms