RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 OR4D11Q8NGI4 311 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 VANGL1Q8TAA9 524 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF417Q8TAU3 575 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 PLPPR2Q96GM1 343 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 MUS81Q96NY9 551 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF587Q96SQ5 575 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-210ENST00000515420 PIP5K1AQ99755 562 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF426Q9BUY5 554 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 FAM107BQ9H098 131 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 SLC7A10Q9NS82 523 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-210ENST00000515420 B3GAT1Q9P2W7 334 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ABCD2Q9UBJ2 740 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 DSCAMO60469 2012 aa11.26□□□□□ -0.61
CLCN3-210ENST00000515420 ROS1P08922 2347 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 CIB4A0PJX0 185 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 CPSF4LA6NMK7 179 aaKnown RBP11.25□□□□□ -0.61
CLCN3-210ENST00000515420 RAD51DO75771 328 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 LYPD3O95274 346 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 IGF2P01344 180 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 IGHV3-9P01782 118 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 THRBP10828 461 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 PAX7P23759 505 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 NUDT2P50583 147 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 GABRA6Q16445 453 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 ACKR1Q16570 336 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 DEFB113Q30KQ7 82 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF704Q6ZNC4 412 aaPredicted RBP11.25□□□□□ -0.61
CLCN3-210ENST00000515420 CARM1Q86X55 608 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 EPHX4Q8IUS5 362 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 LZICQ8WZA0 190 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 PIGTQ969N2 578 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 ALG2Q9H553 416 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 MRPL39Q9NYK5 338 aaKnown RBP11.25□□□□□ -0.61
CLCN3-210ENST00000515420 USP22Q9UPT9 525 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 SH3GLB1Q9Y371 365 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 F8P00451 2351 aa11.25□□□□□ -0.61
CLCN3-210ENST00000515420 CADP27708 2225 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF587BE7ETH6 402 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 NME4O00746 187 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF432O94892 652 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 OR5F1O95221 314 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 THY1P04216 161 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 RBM34P42696 430 aaKnown RBP11.24□□□□□ -0.61
CLCN3-210ENST00000515420 SLC7A2P52569 658 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 SELENOWP63302 87 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 LIPEQ05469 1076 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 STK11Q15831 433 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 LRRC23Q53EV4 343 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-210ENST00000515420 CYBRD1Q53TN4 286 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 TTC33Q6PID6 262 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-210ENST00000515420 PIGWQ7Z7B1 504 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 LSRQ86X29 649 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-210ENST00000515420 RBM45Q8IUH3 476 aaKnown RBP11.24□□□□□ -0.61
CLCN3-210ENST00000515420 FKRPQ9H9S5 495 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 OBP2BQ9NPH6 170 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 SEC14L4Q9UDX3 406 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 SLC7A7Q9UM01 511 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 ARL2BPQ9Y2Y0 163 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 AMDHD2Q9Y303 409 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 RNF115Q9Y4L5 304 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 NOX1Q9Y5S8 564 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 MAGED1Q9Y5V3 778 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-210ENST00000515420 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
CLCN3-210ENST00000515420 MS4A18H0YCH9 400 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 HS3ST1O14792 307 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 TRAF3IP2O43734 574 aaPredicted RBP11.23□□□□□ -0.61
CLCN3-210ENST00000515420 SLC43A1O75387 559 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 DCTN3O75935 186 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 KRT33AO76009 404 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 CD3EP07766 207 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 NQO1P15559 274 aaKnown RBP11.23□□□□□ -0.61
CLCN3-210ENST00000515420 HOXC12P31275 282 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 SELENOPP49908 381 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 GYS2P54840 703 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 SH3BGRP55822 239 aaPredicted RBP11.23□□□□□ -0.61
CLCN3-210ENST00000515420 CLDN17P56750 224 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 LTBQ06643 244 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 PUDPQ08623 228 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 C1DQ13901 141 aaKnown RBP11.23□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF74Q16587 644 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 MS4A18Q3C1V0 323 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 NIPAL3Q6P499 406 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 WDR88Q6ZMY6 472 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 PXKQ7Z7A4 578 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 TSPYL5Q86VY4 417 aaPredicted RBP11.23□□□□□ -0.61
CLCN3-210ENST00000515420 P3H2Q8IVL5 708 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 UEVLDQ8IX04 471 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 LRRC75A-AS1Q8N1F1 130 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF611Q8N823 705 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 ANKS4BQ8N8V4 417 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 OR5J2Q8NH18 312 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms