RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 GPR176Q14439 515 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 C2orf76Q3KRA6 126 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF534Q76KX8 674 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 TMPRSS7Q7RTY8 843 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 DPPA2Q7Z7J5 298 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 FUNDC1Q8IVP5 155 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 MCATQ8IVS2 390 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ZBTB44Q8NCP5 570 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 SLC6A20Q9NP91 592 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 C17orf105B2RV13 164 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 D6RAR5 112 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 M0QYG6 137 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 GFRA2O00451 464 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 KCNK5O95279 499 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 HOXA9P31269 272 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ISL1P61371 349 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 Q6ZSR9 355 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 BCDIN3DQ7Z5W3 292 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 NLGN4YQ8NFZ3 816 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ASB11Q8WXH4 323 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 TANKQ92844 425 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 SLC25A21Q9BQT8 299 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 CITO14578 2027 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 CYTIPO60759 359 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 F13BP05160 661 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 HIST1H1TP22492 207 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 AOAHP28039 575 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 IMPA1P29218 277 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 TACR3P29371 465 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 EXOSC7Q15024 291 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 CTSL3PQ5NE16 218 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 FAM199XQ6PEV8 388 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 USP53Q70EK8 1073 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 RNF113BQ8IZP6 322 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 UPRTQ96BW1 309 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 CDH20Q9HBT6 801 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 OR52A4PA6NMU1 304 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 RAF1P04049 648 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 P04436 131 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 MGST1P10620 155 aaKnown RBP12.35□□□□□ -0.43
TCOF1-214ENST00000515035 MAKP20794 623 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 SLC35A2P78381 396 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 HHEXQ03014 270 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 TLE1Q04724 770 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 MELKQ14680 651 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ADIRFQ15847 76 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 LIX1LQ8IVB5 337 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 MKXQ8IYA7 352 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF75AQ96N20 296 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 CCDC88AQ3V6T2 1871 aa12.35□□□□□ -0.43
TCOF1-214ENST00000515035 SMAD6O43541 496 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ZNF266Q14584 549 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CST6Q15828 149 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 KDM4DQ6B0I6 523 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 MDGA2Q7Z553 956 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 OR52R1Q8NGF1 315 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 C12orf57Q99622 126 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CUTCQ9NTM9 273 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 PRAMEF27A3QJZ7 478 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 PDE7AQ13946 482 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ATPAF1Q5TC12 328 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 PRAMEF9Q5VWM5 478 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 Q6ZTK2 550 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 TMEM25Q86YD3 366 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 KCNRGQ8N5I3 272 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 OR14L1PQ8NHC6 308 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 TSSK2Q96PF2 358 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ALG12Q9BV10 488 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 KATNB1Q9BVA0 655 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SLC17A9Q9BYT1 436 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 NPFFR2Q9Y5X5 522 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 GJE1A6NN92 205 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 MT-ND4LP03901 98 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-214ENST00000515035 BCKDHBP21953 392 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 LAP3P28838 519 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 HTR1FP30939 366 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 FABP6P51161 128 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 ATP1B3P54709 279 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 SHEQ5VZ18 495 aa12.34□□□□□ -0.43
TCOF1-214ENST00000515035 WBP2NLQ6ICG8 309 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms