RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KATNB1Q9BVA0 655 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ASPNQ9BXN1 380 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ANGPTL4Q9BY76 406 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 SH2D2AQ9NP31 389 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 MRPL39Q9NYK5 338 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 TAS2R5Q9NYW4 299 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 PPP4R1LQ9P1A2 415 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 SSR3Q9UNL2 185 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CORINQ9Y5Q5 1042 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CHCHD2Q9Y6H1 151 aaPredicted RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 ACACBO00763 2458 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 A0A075B6Q4 140 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 TRDV1A0A1B0GX56 115 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 OR6C68A6NDL8 312 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 C4orf47A7E2U8 309 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 C12orf71A8MTZ7 269 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 B4DXG7 233 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 ZNF670-ZNF695F2Z2N8 137 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 AGRPO00253 132 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 CDK2AP1O14519 115 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 SPI1P17947 270 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 TCN2P20062 427 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 GABRA5P31644 462 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 SOX3P41225 446 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 EIF1P41567 113 aaKnown RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 RPS5P46782 204 aaKnown RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 SSR4P51571 173 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 BMXP51813 675 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 TAS2R43P59537 309 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 LSM3P62310 102 aaKnown RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 RPS15P62841 145 aaKnown RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 ERVK-25P63136 954 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 TRAM1Q15629 374 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 PLPPR5Q32ZL2 321 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 ZNF404Q494X3 552 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 KLHL12Q53G59 568 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 LINC01590Q5TEZ4 76 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 OR2G6Q5TZ20 316 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 JMJD6Q6NYC1 403 aaPredicted RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 LHFPL3Q86UP9 236 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 RPS19BP1Q86WX3 136 aaKnown RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 C10orf53Q8N6V4 93 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 ADPRHL1Q8NDY3 354 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 SDR9C7Q8NEX9 313 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 OR10G3Q8NGC4 313 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 OR51G2Q8NGK0 314 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 OR4K13Q8NH42 304 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 HAVCR2Q8TDQ0 301 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 PAQR8Q8TEZ7 354 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 GATAD2BQ8WXI9 593 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 SMPDL3BQ92485 455 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 BORCS5Q969J3 196 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 DDIT4LQ96D03 193 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 MRPL48Q96GC5 212 aaKnown RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 SGCZQ96LD1 299 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 Q96M85 177 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 MNTQ99583 582 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 CHCHD6Q9BRQ6 235 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 CENPOQ9BU64 300 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 ALG8Q9BVK2 526 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 OR51V1Q9H2C8 321 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 METTL7AQ9H8H3 244 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 MED20Q9H944 212 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 MARCH7Q9H992 704 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 BABAM2Q9NXR7 383 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 KLRF1Q9NZS2 232 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 PISDQ9UG56 409 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 ADAM18Q9Y3Q7 739 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 SPIN1Q9Y657 262 aaPredicted RBP7.57□□□□□ -1.2
RNF4-220ENST00000513578 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 DOCK10Q96BY6 2186 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 LAMA1P25391 3075 aa7.57□□□□□ -1.2
RNF4-220ENST00000513578 TEX13CA0A0J9YWL9 993 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 DAPL1A0PJW8 107 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZC3H12DA2A288 527 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 C17orf51A8MQB3 221 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 CLDN25C9JDP6 229 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 FAM47E-STBD1D6RA91 191 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 BLOC1S5-TXNDC5H3BN57 136 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 PLPP3O14495 311 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 SLC30A4O14863 429 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 PLPP2O43688 288 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TRIM3O75382 744 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 LALBAP00709 142 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 RENP00797 406 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 IL1AP01583 271 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 MT-ND5P03915 603 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 HLA-DPB1P04440 258 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 SERPINA7P05543 415 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TGM1P22735 817 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 CD82P27701 267 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 GRPRP30550 384 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 CDKN2AP42771 156 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 ENTPD1P49961 510 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZNF41P51814 821 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 BLVRAP53004 296 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms