RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 GATSQ8NAP1 163 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 PDXPQ96GD0 296 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 KLHL15Q96M94 604 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SLC25A21Q9BQT8 299 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 BTBD2Q9BX70 525 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 NXF2Q9GZY0 626 aaKnown RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 NOX4Q9NPH5 578 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 LHX3Q9UBR4 397 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CHST2Q9Y4C5 530 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 ETV7Q9Y603 341 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 DCDC2BA2VCK2 349 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 OR52A4PA6NMU1 304 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF705GA8MUZ8 300 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 PRAMEF26H0Y7S4 382 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 FABP1P07148 127 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CD53P19397 219 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 GJA4P35212 333 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 MAGEB1P43366 347 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SIM1P81133 766 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 GRM7Q14831 915 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 LCTLQ6UWM7 567 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 MBOAT2Q6ZWT7 520 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 NAA40Q86UY6 237 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 OR4N5Q8IXE1 308 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SFXN5Q8TD22 340 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 DTD2Q96FN9 168 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SLC25A44Q96H78 314 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 ZC3HAV1LQ96H79 300 aaKnown RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 LINC00052Q96N35 136 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 G6PC3Q9BUM1 346 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CNTNAP3Q9BZ76 1288 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 LUZP4Q9P127 313 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 RARRES3Q9UL19 164 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 KIF13BQ9NQT8 1826 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SLC6A9P48067 706 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 MEOX2P50222 304 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CLDN2P57739 230 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 BDH1Q02338 343 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CHAF1BQ13112 559 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 FAM78AQ5JUQ0 283 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 Q6ZSR6 202 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SLC16A9Q7RTY1 509 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF679Q8IYX0 411 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 MS4A4EQ96PG1 132 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 FTSJ1Q9UET6 329 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 LSM5Q9Y4Y9 91 aaKnown RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 SOX1O00570 391 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 TP53I11O14683 189 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 NAT2P11245 290 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 MGMTP16455 207 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 POU3F3P20264 500 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 OPRD1P41143 372 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 CSNK1DP48730 415 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 HERV-K104P61576 105 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 PDE7AQ13946 482 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF628Q5EBL2 1059 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 C9orf50Q5SZB4 431 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 OVCH1Q7RTY7 1134 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 RNF113BQ8IZP6 322 aaKnown RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 RASGEF1AQ8N9B8 481 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 OR4D10Q8NGI6 311 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 DOK4Q8TEW6 326 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 THAP3Q8WTV1 239 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 HHIPQ96QV1 700 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 HCAR1Q9BXC0 346 aa10.43□□□□□ -0.74
TCOF1-211ENST00000513346 TCEAL2Q9H3H9 227 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-211ENST00000513346 TRAV27A0A087WT01 109 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 A0A0A6YYH2 397 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SLC22A23A1A5C7 686 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 LRIT2A6NDA9 550 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 A6NJ64 397 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TRIM77I1YAP6 450 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SYT5O00445 386 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 YKT6O15498 198 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 H2BFMP0C1H6 154 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CTXN1P60606 82 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TRA2BP62995 288 aaKnown RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ALG1LQ6GMV1 187 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SLCO4C1Q6ZQN7 724 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 NDUFAF7Q7L592 441 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TGIF2Q9GZN2 237 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 UBQLN3Q9H347 655 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ANKRD19PQ9H560 264 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 ZNF701Q9NV72 531 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TAS2R5Q9NYW4 299 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CNOT1A5YKK6 2376 aaKnown RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 UBR3Q6ZT12 1888 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SMCO3A2RU48 225 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 C11orf98E9PRG8 122 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 TO15178 435 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PLA2G10O15496 165 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 F11P03951 625 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 CPT2P23786 658 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SOX18P35713 384 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 P2RY2P41231 377 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 IDH3GP51553 393 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-211ENST00000513346 PRPS1P60891 318 aa10.42□□□□□ -0.74
TCOF1-211ENST00000513346 SLC14A1Q13336 389 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms