RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SLC9A3P48764 834 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ARHGDIAP52565 204 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 AGFG1P52594 562 aaKnown RBP6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 PER3P56645 1201 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 PDK3Q15120 406 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 SEC23BQ15437 767 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ATP6AP1Q15904 470 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ANKDD1AQ495B1 522 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 RIPPLY2Q5TAB7 128 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 SLC46A3Q7Z3Q1 461 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 NANOGNBQ7Z5D8 188 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 FJX1Q86VR8 437 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 LSRQ86X29 649 aaPredicted RBP6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 MCEMP1Q8IX19 187 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 CDK20Q8IZL9 346 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 RPRMLQ8N4K4 120 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 C10orf53Q8N6V4 93 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 TMEM99Q8N816 258 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 C9orf106Q8NAJ2 232 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 OR4C15Q8NGM1 316 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 OR5J2Q8NH18 312 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ZNF417Q8TAU3 575 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ABHD3Q8WU67 409 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ROBO4Q8WZ75 1007 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 GMPPAQ96IJ6 420 aaPredicted RBP6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 MOGAT1Q96PD6 335 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 ZNF587Q96SQ5 575 aaPredicted RBP6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 TACO1Q9BSH4 297 aaKnown RBP6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 BDH2Q9BUT1 245 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 VNN3Q9NY84 501 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 MRPL39Q9NYK5 338 aaKnown RBP6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 U3KQV3 271 aa6.77□□□□□ -1.33
HMGXB3-204ENST00000513318 RELNP78509 3460 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 IGHV3-15A0A0B4J1V0 119 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 A0A1W2PNV4 684 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 ZNF716A6NP11 495 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 HSPB2A8KAH6 182 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 EFCAB9A8MZ26 197 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 LRRN3E7EW58 273 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 H3BNX3 289 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 J3QKU1 62 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 LRRTM2O43300 516 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 WIPF1O43516 503 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 CCNB2O95067 398 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PLGP00747 810 aaPredicted RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 HIST1H2ABP04908 130 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 TMIGD3P0DMS9 266 aaPredicted RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 FUT1P19526 365 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 CBLP22681 906 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 CEACAM8P31997 349 aaPredicted RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 GPR4P46093 362 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 OMPP47874 163 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 P2RY4P51582 365 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 SLC16A1P53985 500 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 RPS4XP62701 263 aaKnown RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 LTBQ06643 244 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PUDPQ08623 228 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 RASGEF1BQ0VAM2 473 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PMPCAQ10713 525 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PPP1R8Q12972 351 aaKnown RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PMS2P3Q13401 168 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 POU4F3Q15319 338 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 HSPB2Q16082 182 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 MICAQ29983 383 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 TMEM201Q5SNT2 666 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 TMEM225Q6GV28 225 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 C1orf94Q6P1W5 598 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PGBD2Q6P3X8 592 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 TBPL2Q6SJ96 375 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PLXDC2Q6UX71 529 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 TMPRSS11FQ6ZWK6 438 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 H1FNTQ75WM6 255 aaPredicted RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 HIST3H2AQ7L7L0 130 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 GCNT2Q8N0V5 402 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 MARVELD2Q8N4S9 558 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 OR10G2Q8NGC3 310 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 OR9Q2Q8NGE9 314 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 GIPC3Q8TF64 312 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 LRTOMTQ8WZ04 291 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 RND1Q92730 232 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 HIST1H2ACQ93077 130 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 NRBF2Q96F24 287 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 FAM46AQ96IP4 442 aaKnown RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 PSD2Q9BQI7 771 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 SF3B5Q9BWJ5 86 aaKnown RBP6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 SFXN3Q9BWM7 321 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 NDEL1Q9GZM8 345 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 BCO1Q9HAY6 547 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 S100A14Q9HCY8 104 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 FANCFQ9NPI8 374 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 EMC3Q9P0I2 261 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 KLHL13Q9P2N7 655 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 RASD1Q9Y272 281 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 SLC5A6Q9Y289 635 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 MYO18BQ8IUG5 2567 aa6.76□□□□□ -1.33
HMGXB3-204ENST00000513318 ICE1Q9Y2F5 2266 aa6.75□□□□□ -1.33
HMGXB3-204ENST00000513318 PRR14LQ5THK1 2151 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms