RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 NRTNQ99748 197 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 NRIP2Q9BQI9 281 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 RIOK1Q9BRS2 568 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 PELOQ9BRX2 385 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 TRIM62Q9BVG3 475 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 HES7Q9BYE0 225 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 PPA2Q9H2U2 334 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 NXF3Q9H4D5 531 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 AZI2Q9H6S1 392 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 SGK2Q9HBY8 427 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 QPCTLQ9NXS2 382 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 COX16Q9P0S2 106 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 NEUROG3Q9Y4Z2 214 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 RLFQ13129 1914 aa2.3□□□□□ -2.04
TRAPPC11-207ENST00000511409 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 PHF3Q92576 2039 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 A0A0G2JLM5 398 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 A6NDX4 124 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CCDC182A6NF36 153 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 SNTNA6NMZ2 147 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 PANO1I0J062 215 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 TRAF3IP2O43734 574 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 B4GALT2O60909 372 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CAPN1P07384 714 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CHTF8P0CG12 524 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 ZNF853P0CG23 659 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CMA1P23946 247 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CRYBB1P53674 252 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 HMGN5P82970 282 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 SCRN3Q0VDG4 424 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 MRPL28Q13084 256 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 ZNF658BQ4V348 819 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CASC10Q5T4H9 136 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 FAM43BQ6ZT52 329 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 ZNF546Q86UE3 836 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 TRIM69Q86WT6 500 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 NBPF5PQ86XG9 351 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 TMEM61Q8N0U2 210 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 FAM71E2Q8N5Q1 922 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 Q8N9W7 124 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 CCDC54Q8NEL0 328 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 FAM110BQ8TC76 370 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 PYROXD1Q8WU10 500 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 NDRG1Q92597 394 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 TM4SF19Q96DZ7 209 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 IFT74Q96LB3 600 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 LINC00167Q96N53 147 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 OR11A1Q9GZK7 315 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 FN3KRPQ9HA64 309 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 IL26Q9NPH9 171 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 GIN1Q9NXP7 522 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 EXTL2Q9UBQ6 330 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 NUFIP1Q9UHK0 495 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 SLC25A15Q9Y619 301 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 NPTNQ9Y639 398 aa2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 PRRC2AP48634 2157 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-207ENST00000511409 PDS5BQ9NTI5 1447 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 FANCIQ9NVI1 1328 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ARHGEF35A5YM69 484 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 HAS3O00219 553 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 FAM189A1O60320 539 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 FCMRO60667 390 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 CA11O75493 328 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 HPGDP15428 266 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 NCF2P19878 526 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 TBPP20226 339 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 CD1CP29017 333 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 BTCP35070 178 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 SLC26A3P40879 764 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 OPRD1P41143 372 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 CSNK1DP48730 415 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ACVR1Q04771 509 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 CYTH1Q15438 398 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 MPPED2Q15777 294 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 PHYHD1Q5SRE7 291 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 C1orf94Q6P1W5 598 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 LRRC31Q6UY01 552 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ACP7Q6ZNF0 438 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 TIFABQ6ZNK6 161 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ARIH2OSQ8N7S6 290 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ACER1Q8TDN7 264 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ZNF799Q96GE5 643 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 FCRL1Q96LA6 429 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 PANX2Q96RD6 677 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 NPY6RQ99463 290 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 CLMPQ9H6B4 373 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 NMRAL1Q9HBL8 299 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 MRPL47Q9HD33 250 aaKnown RBP2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ZNF331Q9NQX6 463 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 HYPKQ9NX55 129 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 DEC1Q9P2X7 70 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 SUN2Q9UH99 717 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 N6AMT1Q9Y5N5 214 aa2.28□□□□□ -2.04
TRAPPC11-207ENST00000511409 ATP10AO60312 1499 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 KANK1Q14678 1352 aa2.27□□□□□ -2.05
TRAPPC11-207ENST00000511409 KIR2DL5BA0A0G2JN68 375 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms