RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 M0QYG6 137 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 FGF17O60258 216 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ACSM4P0C7M7 580 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ZNF806P0C7X5 589 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 GUCA1AP43080 201 aaPredicted RBP13.71□□□□□ -0.21
USP38-202ENST00000510377 KCNAB1Q14722 419 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 CDK5R1Q15078 307 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 GSG1Q2KHT4 349 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
USP38-202ENST00000510377 FAM78AQ5JUQ0 283 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 SFRP5Q5T4F7 317 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ULK3Q6PHR2 472 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 TSSK4Q6SA08 328 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 NHLRC1Q6VVB1 395 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 Q6ZTK2 550 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 OR11H4Q8NGC9 324 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 S100A13Q99584 98 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
USP38-202ENST00000510377 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.22
USP38-202ENST00000510377 CD34P28906 385 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 PRKXP51817 358 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 ARFRP1Q13795 201 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 FAM74A1Q5RGS3 127 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 TMPRSS9Q7Z410 1059 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 LIX1LQ8IVB5 337 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 ZNF615Q8N8J6 731 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 OR51S1Q8NGJ8 323 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 GPR148Q8TDV2 347 aa13.71□□□□□ -0.22
USP38-202ENST00000510377 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 RECKO95980 971 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 ADH1BP00325 375 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 S100A10P60903 97 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 FAM122CQ6P4D5 195 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 TMEM17Q86X19 198 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 IL17RCQ8NAC3 791 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 OR5M1Q8NGP8 315 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 ZC3HAV1LQ96H79 300 aaKnown RBP13.7□□□□□ -0.22
USP38-202ENST00000510377 WDR92Q96MX6 357 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 PCDHB16Q9NRJ7 776 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 SPAG17Q6Q759 2223 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 AK1P00568 194 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 DCNP07585 359 aaKnown RBP13.7□□□□□ -0.22
USP38-202ENST00000510377 MAT1AQ00266 395 aaKnown RBP13.7□□□□□ -0.22
USP38-202ENST00000510377 MC2RQ01718 297 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 DPTQ07507 201 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 GLT8D1Q68CQ7 371 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 KLHL24Q6TFL4 600 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 TMEM205Q6UW68 189 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 SLC35F3Q8IY50 421 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 OR6M1Q8NGM8 313 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 OR10K1Q8NGX5 313 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 FGF13Q92913 245 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 PELI1Q96FA3 418 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 TBC1D29Q9UFV1 150 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 RABL2BQ9UNT1 228 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 H0Y8X5 98 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 CCSO14618 274 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 PAPLNO95428 1278 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 GIMD1P0DJR0 217 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 CBFBQ13951 182 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 PLA1AQ53H76 456 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 LIPNQ5VXI9 398 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 OR7E24Q6IFN5 339 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 ANKRD33Q7Z3H0 272 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 SMIM4Q8WVI0 70 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 PATE1Q8WXA2 126 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 SMIM19Q96E16 107 aa13.7□□□□□ -0.22
USP38-202ENST00000510377 MS4A7Q9GZW8 240 aaPredicted RBP13.7□□□□□ -0.22
USP38-202ENST00000510377 GPRIN2O60269 458 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 EGFP01133 1207 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 C5AR1P21730 350 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 SMAD2Q15796 467 aaKnown RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 ZCCHC12Q6PEW1 402 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 TMUB2Q71RG4 321 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 SSX6Q7RTT6 188 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 PTP4A1Q93096 173 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 METTL8Q9H825 291 aaKnown RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 IFITM5A6NNB3 132 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 C2orf74A8MZ97 194 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 GABARAPH6UMI1 98 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 SDC3O75056 442 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 FOSL2P15408 326 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 M6PRP20645 277 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 MAOBP27338 520 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 MAP2K6P52564 334 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 CEBPGP53567 150 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 SPOCK1Q08629 439 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 RNASE10Q5GAN6 216 aaKnown RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 C12orf45Q8N5I9 185 aaPredicted RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 SEC61A2Q9H9S3 476 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 ACAD8Q9UKU7 415 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 TBX21Q9UL17 535 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
USP38-202ENST00000510377 ZDBF2Q9HCK1 2354 aa13.69□□□□□ -0.22
USP38-202ENST00000510377 CDC14CA4D256 554 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms