RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RGS7BPQ6MZT1 257 aaPredicted RBP9.04□□□□□ -0.96
SNF8-207ENST00000509995 NIPAL3Q6P499 406 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 BTNL3Q6UXE8 466 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 LRRN1Q6UXK5 716 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 RPS27LQ71UM5 84 aaKnown RBP9.04□□□□□ -0.96
SNF8-207ENST00000509995 GRINAQ7Z429 371 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 LSRQ86X29 649 aaPredicted RBP9.04□□□□□ -0.96
SNF8-207ENST00000509995 CCDC36Q8IYA8 594 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 SPICQ8N5J4 248 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 POU5F2Q8N7G0 328 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 OR4S1Q8NGB4 309 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 KIF18AQ8NI77 898 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 MGARPQ8TDB4 240 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 CDKL2Q92772 493 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 CHMP6Q96FZ7 201 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 ZNF75AQ96N20 296 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 TBX15Q96SF7 602 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 LINC00470Q9BZP3 86 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 SERHL2Q9H4I8 314 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
SNF8-207ENST00000509995 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 SLC7A8Q9UHI5 535 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 ZNF225Q9UK10 706 aa9.04□□□□□ -0.96
SNF8-207ENST00000509995 ZNF816-ZNF321PA0A0X1KG74 233 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 AQP7P3A6NL99 342 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 F5H0A9 414 aaPredicted RBP9.03□□□□□ -0.96
SNF8-207ENST00000509995 STX16-NPEPL1H3BU86 382 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 MANBAO00462 879 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 STX16O14662 325 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 PDPK1O15530 556 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 TSPAN9O75954 239 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 IGHV4-59P01825 116 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 HLA-HP01893 362 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 KRT6AP02538 564 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 KRT6BP04259 564 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 UBTFL6P0CB48 400 aaPredicted RBP9.03□□□□□ -0.96
SNF8-207ENST00000509995 CCNA2P20248 432 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 SPRP35270 261 aaPredicted RBP9.03□□□□□ -0.96
SNF8-207ENST00000509995 KRT6CP48668 564 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 ARL4CP56559 192 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 SELENOVP59797 346 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 GSG1Q2KHT4 349 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 ESCO2Q56NI9 601 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 GPR157Q5UAW9 335 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 PRAMEF8Q5VWM4 474 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 PRAMEF7Q5VXH5 474 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 DHRS7BQ6IAN0 325 aaPredicted RBP9.03□□□□□ -0.96
SNF8-207ENST00000509995 GDPGP1Q6ZNW5 385 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 PIP4P2Q8N4L2 257 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 KLHL36Q8N4N3 616 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 TMEM99Q8N816 258 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 C11orf44Q8N8P7 122 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 CIDECQ96AQ7 238 aaPredicted RBP9.03□□□□□ -0.96
SNF8-207ENST00000509995 PIGUQ9H490 435 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 SLCO1C1Q9NYB5 712 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 PCDHGB4Q9UN71 923 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 NPTNQ9Y639 398 aa9.03□□□□□ -0.96
SNF8-207ENST00000509995 SLC22A23A1A5C7 686 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 OR4F21O95013 312 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 AKR7A3O95154 331 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 TGDSO95455 350 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 CSTAP01040 98 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 RPS17P08708 135 aaKnown RBP9.02□□□□□ -0.97
SNF8-207ENST00000509995 ZNF250P15622 560 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 TSPAN8P19075 237 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 PDIA2Q13087 525 aaKnown RBP9.02□□□□□ -0.97
SNF8-207ENST00000509995 CDK5R2Q13319 367 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 LASP1Q14847 261 aaKnown RBP9.02□□□□□ -0.97
SNF8-207ENST00000509995 TMEM155Q4W5P6 130 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 ZFP28Q8NHY6 868 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 ZNF563Q8TA94 476 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 CFHR4Q92496 578 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 DDIT4LQ96D03 193 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 ZNF837Q96EG3 531 aaPredicted RBP9.02□□□□□ -0.97
SNF8-207ENST00000509995 NEURL3Q96EH8 262 aa9.02□□□□□ -0.97
SNF8-207ENST00000509995 IQCGQ9H095 443 aaKnown RBP9.02□□□□□ -0.97
SNF8-207ENST00000509995 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.97
SNF8-207ENST00000509995 IGHV2-70DA0A0C4DH43 119 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 POC1B-GALNT4F8VUJ3 575 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 TNFRSF13BO14836 293 aaPredicted RBP9.01□□□□□ -0.97
SNF8-207ENST00000509995 MGRN1O60291 552 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 HMGN2P05204 90 aaKnown RBP9.01□□□□□ -0.97
SNF8-207ENST00000509995 SBK2P0C263 348 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 OR8G3PP0DMU2 310 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 CD79AP11912 226 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 CDH13P55290 713 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 BTKQ06187 659 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 CEACAM16Q2WEN9 425 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 DMRTC1Q5HYR2 192 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 KLC3Q6P597 504 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 CREB3L2Q70SY1 520 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 CCDC91Q7Z6B0 441 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 TMEM139Q8IV31 216 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 GALNT4Q8N4A0 578 aa9.01□□□□□ -0.97
SNF8-207ENST00000509995 SYNPRQ8TBG9 265 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms