RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 BDH2Q9BUT1 245 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 ALG2Q9H553 416 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 PRDM4Q9UKN5 801 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 AMDHD2Q9Y303 409 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 TRAV36DV7A0A075B6V5 113 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 CPSF4LA6NMK7 179 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 E7EQL1 145 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 LRRN3E7EW58 273 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 M0QX08 132 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 AIM2O14862 343 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 UPK3AO75631 287 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 LY6G6DO95868 133 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 NQO1P15559 274 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF43P17038 809 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 PTAFRP25105 342 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 ARFIP2P53365 341 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 CDH12P55289 794 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 PCBP3P57721 371 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 TUBA1BP68363 451 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 TUBA4AP68366 448 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 C1DQ13901 141 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 VEZF1Q14119 521 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 DUSP7Q16829 419 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 FAM69AQ5T7M9 428 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 CGB2Q6NT52 195 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 TUBA1AQ71U36 451 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 SSX8Q7RTT4 187 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 ABHD12BQ7Z5M8 362 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 C1orf162Q8NEQ5 155 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 GPR32P1Q8NGA4 272 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 TRMT61AQ96FX7 289 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 POM121Q96HA1 1249 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 MCHR1Q99705 422 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 TRAF4Q9BUZ4 470 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 AMBRA1Q9C0C7 1298 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 KAT8Q9H7Z6 458 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 C12orf10Q9HB07 376 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 KLHL14Q9P2G3 628 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 GDF2Q9UK05 429 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 ATP23Q9Y6H3 246 aa12.97□□□□□ -0.33
UBE2D3-228ENST00000508974 ZANQ9Y493 2812 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 A0A096LPE4 126 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 A0A0B4J2E0 115 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 A0A1B0GX12 115 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 A0A1W2PPZ6 126 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 OVOL3O00110 214 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 OR2T1O43869 369 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 SERPINI2O75830 405 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 CD8AP01732 235 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 PAX1P15863 534 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 HOXB4P17483 251 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 ACVR1BP36896 505 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 PRPS1P60891 318 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 ROR2Q01974 943 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 GUCY1A3Q02108 690 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 RBBP4Q09028 425 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 TRMT5Q32P41 509 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 MMEL1Q495T6 779 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 RABL3Q5HYI8 236 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 METTL21CQ5VZV1 264 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 CARD17Q5XLA6 110 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 FAM91A1Q658Y4 838 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 RBM45Q8IUH3 476 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 DEPDC4Q8N2C3 294 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 C17orf78Q8N4C9 275 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 MAPK1IP1LQ8NDC0 245 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 BHLHE22Q8NFJ8 381 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC26A7Q8TE54 656 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 HTRA1Q92743 480 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 OXGR1Q96P68 337 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 ARHGDIGQ99819 225 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 FAIMQ9NVQ4 179 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 B3GAT1Q9P2W7 334 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 USP22Q9UPT9 525 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.33
UBE2D3-228ENST00000508974 NSD1Q96L73 2696 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 A0A087WUJ7 227 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 ATP6V1G2-DDX39BF2Z307 99 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 MRASO14807 208 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 TMCC2O75069 709 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 SLC43A1O75387 559 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 SEC14L2O76054 403 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 WNT11O96014 354 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 HPRP00739 348 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 HEXAP06865 529 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 HLA-DOBP13765 273 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 PCGF2P35227 344 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 FABP6P51161 128 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 KLF10Q13118 480 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 TNK1Q13470 666 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 NPTX1Q15818 432 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 TBRG1Q3YBR2 411 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 ENTPD8Q5MY95 495 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms