RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 KPNA4O00629 521 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 KRT33AO76009 404 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 KRT36O76013 467 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 CGAP01215 116 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 BGLAPP02818 100 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 GRPRP30550 384 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 CD79BP40259 229 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 OR3A2P47893 321 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
NUP54-207ENST00000508583 TGFBR3Q03167 851 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 GK3PQ14409 553 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 ZNF74Q16587 644 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 FGD3Q5JSP0 725 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 C1QTNF12Q5T7M4 302 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 SP5Q6BEB4 398 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 CASP12Q6UXS9 341 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 TFAP2EQ6VUC0 442 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 CYP2R1Q6VVX0 501 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 MEX3BQ6ZN04 569 aaKnown RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 NANOGNBQ7Z5D8 188 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 PXKQ7Z7A4 578 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 LSRQ86X29 649 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 ZDHHC21Q8IVQ6 265 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 CCDC103Q8IW40 242 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 UEVLDQ8IX04 471 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 DMRTC2Q8IXT2 367 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 UBE2J2Q8N2K1 259 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 LINC00471Q8N535 108 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 POMGNT2Q8NAT1 580 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 ANKK1Q8NFD2 765 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 OR5J2Q8NH18 312 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 TMEM255BQ8WV15 326 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 SLC7A6OSQ96CW6 309 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 PRSS27Q9BQR3 290 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 ENKD1Q9H0I2 346 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 OPN3Q9H1Y3 402 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 NMNAT1Q9HAN9 279 aaPredicted RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 STX18Q9P2W9 335 aaKnown RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 UPB1Q9UBR1 384 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 KCNN3Q9UGI6 736 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 TMCC3Q9ULS5 477 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 GPR52Q9Y2T5 361 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 NOX1Q9Y5S8 564 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 FLVCR1Q9Y5Y0 555 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 V9GYQ6 96 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 HCFC1P51610 2035 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 ENO4A6NNW6 628 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 GSC2O15499 205 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 RNF13O43567 381 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 CIB2O75838 187 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 OR7A10O76100 309 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 PRSS23O95084 383 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 GADD45GO95257 159 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 LYPD3O95274 346 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 CH25HO95992 272 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 THY1P04216 161 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ASAH2BP0C7U1 165 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ADORA3P0DMS8 318 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 RAP2AP10114 183 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 SAGP10523 405 aaPredicted RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 NR2C1P13056 603 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 IGFBP2P18065 325 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 PSMB1P20618 241 aaKnown RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 ATP6V1B2P21281 511 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 AHCYP23526 432 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 IL32P24001 234 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 HOXC12P31275 282 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 UGT2B10P36537 528 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 KIR2DL3P43628 341 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 YAP1P46937 504 aaKnown RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 SLC9A3P48764 834 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 CBX1P83916 185 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 SPIBQ01892 262 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 EXOC3L2Q2M3D2 409 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 FBXW9Q5XUX1 488 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 HIST2H2BCQ6DN03 193 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 WDR88Q6ZMY6 472 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 MBOAT2Q6ZWT7 520 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 CREB3L2Q70SY1 520 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 AAED1Q7RTV5 226 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 PIWIL3Q7Z3Z3 882 aaKnown RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 P3H2Q8IVL5 708 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 NKAIN4Q8IVV8 208 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ACBD4Q8NC06 268 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 STEAP2Q8NFT2 490 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 FAM222BQ8WU58 562 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 LIPHQ8WWY8 451 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 KISS1RQ969F8 398 aaPredicted RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 BPIFA2Q96DR5 249 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 CLPTM1LQ96KA5 538 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 C7orf34Q96L11 122 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 DHRS1Q96LJ7 313 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 ADAD1Q96M93 576 aaKnown RBP8.11□□□□□ -1.11
NUP54-207ENST00000508583 DACH2Q96NX9 599 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 MOGAT1Q96PD6 335 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 SLCO5A1Q9H2Y9 848 aa8.11□□□□□ -1.11
NUP54-207ENST00000508583 B3GAT2Q9NPZ5 323 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms