RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SLC41A2Q96JW4 573 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 KCNIP1Q9NZI2 227 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 REV1Q9UBZ9 1251 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 TRAV27A0A087WT01 109 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 M0R082 166 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 DCTN6O00399 190 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 TNFP01375 233 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 GYPBP06028 91 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 EIF4EP06730 217 aaKnown RBP6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 GALTP07902 379 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 FURINP09958 794 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 CSNK1DP48730 415 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 FOXK2Q01167 660 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 DBX2Q6ZNG2 339 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 PRSS45Q7RTY3 260 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 KCNG3Q8TAE7 436 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 CYB5D2Q8WUJ1 264 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 TMED6Q8WW62 240 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 EDAQ92838 391 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 JSRP1Q96MG2 331 aaPredicted RBP6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 CSF3RQ99062 836 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 ZCCHC4Q9H5U6 513 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 METTL7AQ9H8H3 244 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 MMP26Q9NRE1 261 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 DUSP22Q9NRW4 184 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 USP36Q9P275 1121 aaKnown RBP6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 USP3Q9Y6I4 520 aa6.8□□□□□ -1.32
UBE2D3-224ENST00000508474 FAM171A2A8MVW0 826 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 SOCS6O14544 535 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 F2P00734 622 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 NAT2P11245 290 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 RAC2P15153 192 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 PCMT1P22061 227 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 FGF9P31371 208 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 CSF2RBP32927 897 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 TXNDC8Q6A555 127 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 MEX3DQ86XN8 651 aaKnown RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 VRK2Q86Y07 508 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF610Q8N9Z0 462 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 IL17RCQ8NAC3 791 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 GATSQ8NAP1 163 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 KREMEN2Q8NCW0 462 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 OR9A2Q8NGT5 310 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 OR1E3Q8WZA6 343 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 TMEM106AQ96A25 262 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 C20orf24Q9BUV8 137 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ELOVL3Q9HB03 270 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 CBLCQ9ULV8 474 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 HMSDA8MTL9 139 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 MMP11P24347 488 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 THBS3P49746 956 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 FABP5Q01469 135 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 PLCXD2Q0VAA5 305 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 LBHQ53QV2 105 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 Q6ZRG5 221 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 Q6ZTK2 550 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 FAM58AQ8N1B3 248 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 NAXEQ8NCW5 288 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 BPIFCQ8NFQ6 507 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 SLC39A7Q92504 469 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 MARVELD3Q96A59 401 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ZC3HAV1LQ96H79 300 aaKnown RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 BCO1Q9HAY6 547 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF286AQ9HBT8 521 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 CYSLTR2Q9NS75 346 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 SLC39A9Q9NUM3 307 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 SIDT1Q9NXL6 827 aaKnown RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 C5AR2Q9P296 337 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ABI3Q9P2A4 366 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 COL2A1P02458 1487 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 NPIPA2E9PIF3 369 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 NPIPA3F8WFD2 350 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF593O00488 134 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 STC2O76061 302 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 H2AFB1P0C5Y9 115 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 RAB5AP20339 215 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 SERPINA2P20848 420 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 EPHA1P21709 976 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 WASP42768 502 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 PSMB3P49720 205 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 MAP2K6P52564 334 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 MRPS34P82930 218 aaKnown RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 HLXQ14774 488 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 MPPED2Q15777 294 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 B3GNTL1Q67FW5 361 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 OR5M10Q6IEU7 315 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 OR2T2Q6IF00 324 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 KLHDC1Q8N7A1 406 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF439Q8NDP4 499 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 OR13C9Q8NGT0 318 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 LILRB1Q8NHL6 650 aaPredicted RBP6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 SPTSSAQ969W0 71 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 DDIT4LQ96D03 193 aa6.79□□□□□ -1.32
UBE2D3-224ENST00000508474 GNPNAT1Q96EK6 184 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms