RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 KRTAP1-1Q07627 177 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 ETFDHQ16134 617 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 TBRG1Q3YBR2 411 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 AGAP6Q5VW22 663 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 OR1K1Q8NGR3 316 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 ZNF417Q8TAU3 575 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 RNF217Q8TC41 542 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 STON2Q8WXE9 905 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 HS6ST2Q96MM7 605 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 ZNF587Q96SQ5 575 aaPredicted RBP12.48□□□□□ -0.41
RAB28-205ENST00000508274 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 RABEP2Q9H5N1 569 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 C12orf10Q9HB07 376 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
RAB28-205ENST00000508274 ABCA1O95477 2261 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 JMJD1CQ15652 2540 aa12.48□□□□□ -0.41
RAB28-205ENST00000508274 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
RAB28-205ENST00000508274 A0A0G2JND7 137 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ZNF587BE7ETH6 402 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ATP6V1G2-DDX39BF2Z307 99 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 M0R3H8 397 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 MFN2O95140 757 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 FABP6P51161 128 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 NCALDP61601 193 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 TUBA1BP68363 451 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 TUBA4AP68366 448 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 OR1Q1Q15612 314 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 FAM69AQ5T7M9 428 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 DNM1P46Q6ZS02 220 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 TUBA1AQ71U36 451 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
RAB28-205ENST00000508274 ARMC8Q8IUR7 673 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 MUC15Q8N387 334 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 DNAJA4Q8WW22 397 aaPredicted RBP12.47□□□□□ -0.41
RAB28-205ENST00000508274 SLC38A4Q969I6 547 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ANKRD27Q96NW4 1050 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ZNF607Q96SK3 696 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 CGREF1Q99674 301 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ARGLU1Q9NWB6 273 aaPredicted RBP12.47□□□□□ -0.41
RAB28-205ENST00000508274 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ANGPT4Q9Y264 503 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 NDUFAF1Q9Y375 327 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ANK3Q12955 4377 aaKnown RBP12.47□□□□□ -0.41
RAB28-205ENST00000508274 TRAV36DV7A0A075B6V5 113 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 A0A096LPE4 126 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 A0A1B0GX12 115 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 A0A1W2PPZ6 126 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 SSX4O60224 188 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ZNF432O94892 652 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ZNF43P17038 809 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 GRPRP30550 384 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 PCBP3P57721 371 aaKnown RBP12.47□□□□□ -0.41
RAB28-205ENST00000508274 ROR2Q01974 943 aaKnown RBP12.47□□□□□ -0.41
RAB28-205ENST00000508274 CYP51A1Q16850 503 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 ULK3Q6PHR2 472 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 FBXL14Q8N1E6 418 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 DEPDC4Q8N2C3 294 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 DPP10Q8N608 796 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 BOD1Q96IK1 185 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 OXGR1Q96P68 337 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 REG4Q9BYZ8 158 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 CBLN4Q9NTU7 201 aa12.47□□□□□ -0.41
RAB28-205ENST00000508274 DNHD1Q96M86 4753 aa12.46□□□□□ -0.41
RAB28-205ENST00000508274 A0A087WUJ7 227 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 LRRN3E7EW58 273 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 AIM2O14862 343 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 ANGPT2O15123 496 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.42
RAB28-205ENST00000508274 OR2T1O43869 369 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 SERPINB7O75635 380 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 WNT11O96014 354 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 HLA-DOBP13765 273 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 IL1RL1Q01638 556 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 SF3A3Q12874 501 aaKnown RBP eCLIP12.46□□□□□ -0.42
RAB28-205ENST00000508274 NFYCQ13952 458 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 DUSP7Q16829 419 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 FAM91A1Q658Y4 838 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 C5orf46Q6UWT4 87 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 C11orf65Q8NCR3 313 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.42
RAB28-205ENST00000508274 ZNF837Q96EG3 531 aaPredicted RBP12.46□□□□□ -0.42
RAB28-205ENST00000508274 SLC47A1Q96FL8 570 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 MOGAT1Q96PD6 335 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 LINC00470Q9BZP3 86 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 TRIM33Q9UPN9 1127 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 RCE1Q9Y256 329 aa12.46□□□□□ -0.42
RAB28-205ENST00000508274 FBP2O00757 339 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms