RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MPZL1O95297 269 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 IGKV3-15P01624 115 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 G6PDP11413 515 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 IMPDH2P12268 514 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 RPL3P39023 403 aaKnown RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 CCT3P49368 545 aaKnown RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 DAG1Q14118 895 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 PTGR1Q14914 329 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 ZNF141Q15928 474 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 OCLNQ16625 522 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 ACSM5Q6NUN0 579 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 EIF3MQ7L2H7 374 aaKnown RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 GRINAQ7Z429 371 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 MAVSQ7Z434 540 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 RNF217Q8TC41 542 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 MAGEE2Q8TD90 523 aaPredicted RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 YIPF5Q969M3 257 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 MAELQ96JY0 434 aaKnown RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 ZNF385AQ96PM9 386 aaKnown RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 WDR55Q9H6Y2 383 aaPredicted RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 ZNF275Q9NSD4 429 aaPredicted RBP11.94□□□□□ -0.5
DDR1-260ENST00000507533 GPATCH2Q9NW75 528 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 ATP6V1HQ9UI12 483 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 CORINQ9Y5Q5 1042 aa11.94□□□□□ -0.5
DDR1-260ENST00000507533 IGHV2OR16-5A0A0B4J2B6 119 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 CENPVL1A0A0U1RR11 272 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 J3QLI3 93 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 M0R233 179 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 SCAMP2O15127 329 aaKnown RBP11.93□□□□□ -0.5
DDR1-260ENST00000507533 PLPP2O43688 288 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 TGDSO95455 350 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 CBR1P16152 277 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 PRPS1L1P21108 318 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 PRTN3P24158 256 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 EPHA3P29320 983 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 RYKP34925 604 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 HPCAL1P37235 193 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 CLDN8P56748 225 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 IL13RA1P78552 427 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 SNTB2Q13425 540 aaKnown RBP11.93□□□□□ -0.5
DDR1-260ENST00000507533 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 KRT80Q6KB66 452 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 EPGNQ6UW88 154 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 LSRQ86X29 649 aaPredicted RBP11.93□□□□□ -0.5
DDR1-260ENST00000507533 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 OR9K2Q8NGE7 335 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 OR56A1Q8NGH5 318 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 OR5D16Q8NGK9 328 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 ZNF317Q96PQ6 595 aaPredicted RBP11.93□□□□□ -0.5
DDR1-260ENST00000507533 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 OR7D2Q96RA2 312 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 MRPL37Q9BZE1 423 aaKnown RBP11.93□□□□□ -0.5
DDR1-260ENST00000507533 SLITRK2Q9H156 845 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 MS4A5Q9H3V2 200 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 ZNF665Q9H7R5 613 aa11.93□□□□□ -0.5
DDR1-260ENST00000507533 FCMRO60667 390 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 EDF1O60869 148 aaKnown RBP11.92□□□□□ -0.5
DDR1-260ENST00000507533 UGT2B17O75795 530 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
DDR1-260ENST00000507533 PGM1P36871 562 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 EVX1P49640 407 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 ZP4Q12836 540 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 OTUD3Q5T2D3 398 aaPredicted RBP11.92□□□□□ -0.5
DDR1-260ENST00000507533 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 REP15Q6BDI9 236 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 PAQR6Q6TCH4 344 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 LINGO2Q7L985 606 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 OLIG3Q7RTU3 272 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 RIMKLAQ8IXN7 391 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 KRTCAP2Q8N6L1 136 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 NATD1Q8N6N6 113 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 LRRC58Q96CX6 371 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 DDIT4LQ96D03 193 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 ALKBH3Q96Q83 286 aaPredicted RBP11.92□□□□□ -0.5
DDR1-260ENST00000507533 PRPF18Q99633 342 aaKnown RBP11.92□□□□□ -0.5
DDR1-260ENST00000507533 PKP2Q99959 881 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 SF3B5Q9BWJ5 86 aaKnown RBP11.92□□□□□ -0.5
DDR1-260ENST00000507533 NELFAQ9H3P2 528 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 MKLN1Q9UL63 735 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 PCDHGB4Q9UN71 923 aa11.92□□□□□ -0.5
DDR1-260ENST00000507533 TMED7-TICAM2A0A0A6YYA0 188 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 TMEM72A0PK05 275 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 BCAS1O75363 584 aaPredicted RBP11.91□□□□□ -0.5
DDR1-260ENST00000507533 STX11O75558 287 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 GSNP06396 782 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 ALDOCP09972 364 aaKnown RBP11.91□□□□□ -0.5
DDR1-260ENST00000507533 LAMP1P11279 417 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 ALDH3B1P43353 468 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 SELENOPP49908 381 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 SEC24CP53992 1094 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 GUCY1A3Q02108 690 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 NPRL3Q12980 569 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 MAPK14Q16539 360 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 MSMPQ1L6U9 139 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 GPAT4Q86UL3 456 aa11.91□□□□□ -0.5
DDR1-260ENST00000507533 TMEM99Q8N816 258 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms