RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ZNF597Q96LX8 424 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 BIRC8Q96P09 236 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM237Q96Q45 408 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GAL3ST4Q96RP7 486 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ATF6BQ99941 703 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SPATA16Q9BXB7 569 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 RSPH9Q9H1X1 276 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TUBB1Q9H4B7 451 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ALG9Q9H6U8 611 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SUDS3Q9H7L9 328 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF665Q9H7R5 613 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CAB39LQ9H9S4 337 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 RDH14Q9HBH5 336 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 PARVBQ9HBI1 364 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 C3orf14Q9HBI5 128 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SLCO1B3Q9NPD5 702 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 MRPL40Q9NQ50 206 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 PRSS16Q9NQE7 514 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 NMRK1Q9NWW6 199 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GTSE1Q9NYZ3 720 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CD274Q9NZQ7 290 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 BAIAP2L1Q9UHR4 511 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GMEB2Q9UKD1 530 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CLEC4EQ9ULY5 219 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 DHRS7Q9Y394 339 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ETV7Q9Y603 341 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 MTCH2Q9Y6C9 303 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 PLXNA3P51805 1871 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 IGLV3-16A0A075B6K0 115 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 IGHV3-16A0A0C4DH30 117 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ATP6AP2A0A1C7CYW4 349 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OR51F1A6NGY5 319 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ACOD1A6NK06 481 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 A8MT66 165 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF724A8MTY0 619 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 A8MX80 341 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 A8MXK9 166 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SUPT3HB4E1H0 165 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SPECC1L-ADORA2AF8WAN1 911 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 K7EPI3 171 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CACNB4O00305 520 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC28A1O00337 649 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 AZIN1O14977 448 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CHUKO15111 745 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 UBDO15205 165 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 KMOO15229 486 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OR1I1O60431 355 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NIPSNAP2O75323 286 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SUPT3HO75486 399 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 STK16O75716 305 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 TM7SF2O76062 418 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CDK14O94921 469 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OR6B1O95007 311 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 WISP3O95389 354 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 STAMBPO95630 424 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HPRP00739 348 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NPPAP01160 153 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 IGHG1P01857 330 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 KRT6AP02538 564 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CATP04040 527 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 KRT6BP04259 564 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 KRT16P08779 473 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HOXC4P09017 264 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 MPC1LP0DKB6 136 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 FOLR2P14207 255 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 IDO1P14902 403 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 UGT1A6P19224 532 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NCF2P19878 526 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GLRA1P23415 457 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 FCARP24071 287 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PTPN4P29074 926 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PRDX6P30041 224 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OXTRP30559 389 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 UGT1A3P35503 534 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 UGT1A5P35504 534 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OPRD1P41143 372 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 MAGEA9P43362 315 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GPR1P46091 355 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 KRT6CP48668 564 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ACADVLP49748 655 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GSK3BP49841 420 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 STX1BP61266 288 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ERVK-16P61578 105 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 KDSRQ06136 332 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ACTN3Q08043 901 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CD300CQ08708 224 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HSPA14Q0VDF9 509 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OVGP1Q12889 678 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ABRQ12979 859 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HTR4Q13639 388 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 IHHQ14623 411 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 TGFBIQ15582 683 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 C3AR1Q16581 482 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SMU1Q2TAY7 513 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 DNAL1Q4LDG9 190 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 BCL7AQ4VC05 210 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HIGD2BQ4VC39 106 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RFTN2Q52LD8 501 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CTSL3PQ5NE16 218 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF678Q5SXM1 525 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms