RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 KRT77Q7Z794 578 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 OR1M1Q8NGA1 313 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 PHYHIPLQ96FC7 376 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 FAM117AQ9C073 453 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 APMAPQ9HDC9 416 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 TAS2R8Q9NYW2 309 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 TBC1D3KA0A087X1G2 549 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 ABHD14A-ACY1A0A1B0GW23 586 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 TBC1D3BA6NDS4 549 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 TBC1D3FA6NER0 549 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 PQBP1O60828 265 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 CSF1P09603 554 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 LAG3P18627 525 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 BCL6P41182 706 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 DCDP81605 110 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 FHL1Q13642 323 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF345Q14585 488 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 TBC1D3GQ6DHY5 549 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 STAC2Q6ZMT1 411 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 OR2W3Q7Z3T1 314 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 AMZ2Q86W34 360 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 OR7G2Q8NG99 324 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 OR14A16Q8NHC5 309 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 MS4A4EQ96PG1 132 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 ALX4Q9H161 411 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 C1orf198Q9H425 327 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 FKRPQ9H9S5 495 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 CCL26Q9Y258 94 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 RAB19A4D1S5 217 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 XRCC3O43542 346 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 CD8AP01732 235 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 PVALBP20472 110 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 CERS1P27544 350 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 NANOS3P60323 173 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 POLR2GP62487 172 aaKnown RBP eCLIP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 PPIAP62937 165 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 PRDX1Q06830 199 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 MRPL2Q5T653 305 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 DHRS7BQ6IAN0 325 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 ARMC10Q8N2F6 343 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 SDR9C7Q8NEX9 313 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 OR52E2Q8NGJ4 325 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 OR51L1Q8NGJ5 315 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 TNFRSF13CQ96RJ3 184 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 SDF2Q99470 211 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 SLC46A2Q9BY10 475 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 CHST6Q9GZX3 395 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF780BQ9Y6R6 833 aa15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 PRRC2BQ5JSZ5 2229 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-211ENST00000506690 ZFPL1O95159 310 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 ADCYAP1P18509 176 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 ADRA2CP18825 462 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 RPS4Y1P22090 263 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 LUMP51884 338 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 UBE2IP63279 158 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 GUCA2BQ16661 112 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 OR51S1Q8NGJ8 323 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 GAREM1Q9H706 876 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 A0A1W2PRU2 124 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 SLC6A6P31641 620 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 METAP1P53582 386 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 DPTQ07507 201 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 DUSP5Q16690 384 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 C4orf46Q504U0 113 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 PAN3Q58A45 887 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 MANEAQ5SRI9 462 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 CBLN2Q8IUK8 224 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 OR2L5Q8NG80 312 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 RNF166Q96A37 237 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 LRFN5Q96NI6 719 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 DEFB118Q96PH6 123 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 TMEM185BQ9H7F4 350 aa15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 USP36Q9P275 1121 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-211ENST00000506690 KANTRA0A1W2PQU2 76 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 IDSB3KWA1 339 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 BCL2L11O43521 198 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 PAK4O96013 591 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 LAMP2P13473 410 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 PLA2G7Q13093 441 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 MAMSTRQ6ZN01 415 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 DMBX1Q8NFW5 382 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 OR2A1Q8NGT9 310 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 OR4K13Q8NH42 304 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 DUSP19Q8WTR2 217 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF75AQ96N20 296 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 CHRNA9Q9UGM1 479 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF230Q9UIE0 474 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 PCDHB10Q9UN67 800 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 TNFSF18Q9UNG2 199 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 GOLGA4Q13439 2230 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 OR2F2O95006 317 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 AKAIN1P0CW23 69 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 C6P13671 934 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 NID1P14543 1247 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 HIST1H1CP16403 213 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 TNFRSF17Q02223 184 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 LTBQ06643 244 aa15.65■□□□□ 0.1
SQSTM1-211ENST00000506690 OR2F1Q13607 317 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms