RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 IGHV1-2P23083 117 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 FOXG1P55316 489 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 MFSD13AQ14CX5 517 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 P2RY6Q15077 328 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 SPATS1Q496A3 300 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 SFRP5Q5T4F7 317 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 FBXW9Q5XUX1 488 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 FKBP9P1Q75LS8 142 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 SLC46A3Q7Z3Q1 461 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 C10orf53Q8N6V4 93 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 SCAIQ8N9R8 606 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 PFN4Q8NHR9 129 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 MED18Q9BUE0 208 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 SLC19A3Q9BZV2 496 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 ACTR6Q9GZN1 396 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 MAN2C1Q9NTJ4 1040 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 MRPL39Q9NYK5 338 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 RHCGQ9UBD6 479 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 GPR52Q9Y2T5 361 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 CORINQ9Y5Q5 1042 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 AKAP9Q99996 3911 aa16.11■□□□□ 0.17
PDLIM7-216ENST00000506537 MS4A18H0YCH9 400 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 TRAF3IP2O43734 574 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 PIP5K1CO60331 668 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 LYZL6O75951 148 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 UBOX5O94941 541 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 CNOT4O95628 575 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 CH25HO95992 272 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 MT-ATP6P00846 226 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 RBM34P42696 430 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 SELENOPP49908 381 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 LSM11P83369 360 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 FOXD4Q12950 439 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 ITGADQ13349 1161 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 MS4A18Q3C1V0 323 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 TSPO2Q5TGU0 170 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 AAED1Q7RTV5 226 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 TMEM200AQ86VY9 491 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 OFCC1Q8IZS5 231 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 LRRC17Q8N6Y2 441 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 TMEM239Q8WW34 195 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 S100PBPQ96BU1 408 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 ZC3HAV1LQ96H79 300 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 LURAP1Q96LR2 239 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 OXGR1Q96P68 337 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 ASPNQ9BXN1 380 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 OR10A4Q9H209 315 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 FANCFQ9NPI8 374 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 RASSF1Q9NS23 344 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 SLC7A10Q9NS82 523 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 C20orf141Q9NUB4 165 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 PARPBPQ9NWS1 579 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 SAMD4AQ9UPU9 718 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 V9GYQ6 96 aa16.1■□□□□ 0.17
PDLIM7-216ENST00000506537 PRR14LQ5THK1 2151 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 LOC102725191A0A1B0GVB3 256 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 DEFB108AA8MXU0 73 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 PDLIM1O00151 329 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 PLPP3O14495 311 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 GMNNO75496 209 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 SEMG1P04279 462 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 HLA-DOBP13765 273 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 NQO1P15559 274 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 LGALS3BPQ08380 585 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 PMS2P3Q13401 168 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 NHLRC1Q6VVB1 395 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 BHLHA15Q7RTS1 189 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 WDFY1Q8IWB7 410 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 UBE2J2Q8N2K1 259 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 ZNF433Q8N7K0 673 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 STEAP2Q8NFT2 490 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 OR5J2Q8NH18 312 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 KISS1RQ969F8 398 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 C7orf34Q96L11 122 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 FKRPQ9H9S5 495 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 TAS2R1Q9NYW7 299 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 ENPP4Q9Y6X5 453 aa16.09■□□□□ 0.17
PDLIM7-216ENST00000506537 A0A1W2PPR1 153 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 PDE5AO76074 875 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ZNF432O94892 652 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 MT-ND1P03886 318 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 HRGP04196 525 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ITGA5P08648 1049 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ASAH2BP0C7U1 165 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 PPP3CBP16298 524 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ZNF43P17038 809 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ATP6V1B2P21281 511 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 CRYGSP22914 178 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 IL32P24001 234 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 CLDN17P56750 224 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 VLDLRP98155 873 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 PUDPQ08623 228 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ST3GAL3Q11203 375 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 FAPQ12884 760 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 IQCCQ4KMZ1 466 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 NSMCE2Q96MF7 247 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 HDHD5Q9BXW7 423 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 SLCO5A1Q9H2Y9 848 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ASB6Q9NWX5 421 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 NDUFAF4Q9P032 175 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms