RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 MED10Q9BTT4 135 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 OSBPL10Q9BXB5 764 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ANGPTL4Q9BY76 406 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLITRK2Q9H156 845 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NXF5Q9H1B4 397 aaKnown RBP3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ANKRD19PQ9H560 264 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GAREM1Q9H706 876 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DDX31Q9H8H2 851 aaKnown RBP3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NANSQ9NR45 359 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLC17A5Q9NRA2 495 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FGF21Q9NSA1 209 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MS4A12Q9NXJ0 267 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MRPL39Q9NYK5 338 aaKnown RBP3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 WRAP73Q9P2S5 460 aaPredicted RBP3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SIX4Q9UIU6 781 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZNF229Q9UJW7 825 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FBXL4Q9UKA2 621 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PILRBQ9UKJ0 227 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NUP50Q9UKX7 468 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 POMT2Q9UKY4 750 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ICAM5Q9UMF0 924 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KPTNQ9Y664 436 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 R4GN57 208 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 BRWD1Q9NSI6 2320 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TANC1Q9C0D5 1861 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MAST4O15021 2626 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MROH7Q68CQ1 1323 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CDH23Q9H251 3354 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NCOR1O75376 2440 aa3.68□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SIP14410 1827 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 EYSQ5T1H1 3165 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PRUNE2Q8WUY3 3088 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MYO7AQ13402 2215 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KCNE1BA0A087WTH5 132 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 hDV102S1A0JD36 115 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TMEM150BA6NC51 233 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FAM74A7A6NL05 159 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TMEM210A6NLX4 147 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ITGB1BP1O14713 200 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 IMPA2O14732 288 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RAB29O14966 203 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TAPBPO15533 448 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SRPX2O60687 465 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 HUS1O60921 280 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 OR5F1O95221 314 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DCNP07585 359 aaKnown RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MYL2P10916 166 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GM2AP17900 193 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TCN1P20061 433 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CA4P22748 312 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PSMB6P28072 239 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PRDX3P30048 256 aaKnown RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SSTR2P30874 369 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 EVI2BP34910 448 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MMP12P39900 470 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CCL23P55773 120 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 IRX1P78414 480 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MGAT3Q09327 533 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FADDQ13158 208 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PMS2P3Q13401 168 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SNTA1Q13424 505 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PIGHQ14442 188 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SF3B4Q15427 424 aaKnown RBP eCLIP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SHHQ15465 462 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 IL17AQ16552 155 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CALCRLQ16602 461 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 HAGHQ16775 308 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FAM74A3Q4VXF1 159 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SAPCD1Q5SSQ6 148 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 C9orf135Q5VTT2 229 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLC22A10Q63ZE4 541 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 STUMQ69YW2 141 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SCYL2Q6P3W7 929 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FAM173BQ6P4H8 233 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TMIGD1Q6UXZ0 262 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CCNI2Q6ZMN8 369 aaPredicted RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLC16A14Q7RTX9 510 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PID1Q7Z2X4 250 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DCXRQ7Z4W1 244 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 C5orf24Q7Z6I8 188 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KCNMB4Q86W47 210 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RNF130Q86XS8 419 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CACUL1Q86Y37 369 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RNF113BQ8IZP6 322 aaKnown RBP3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 EID3Q8N140 333 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PGBD5Q8N414 524 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DHRSXQ8N5I4 330 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 LMNTD1Q8N9Z9 388 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZNF114Q8NC26 417 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 LINC00301Q8NCQ3 95 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 OR52N5Q8NH56 324 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ERMNQ8TAM6 284 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 UBA3Q8TBC4 463 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GPR148Q8TDV2 347 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TANKQ92844 425 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NXPE2Q96DL1 559 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TIMD4Q96H15 378 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PLEKHA8Q96JA3 519 aa3.67□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SERAC1Q96JX3 654 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms