RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LIPMQ5VYY2 423 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CARD17Q5XLA6 110 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RUSC1-AS1Q66K80 236 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CLEC6AQ6EIG7 209 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 OR7E24Q6IFN5 339 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 NIPAL3Q6P499 406 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ANKRD16Q6P6B7 361 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CCBE1Q6UXH8 406 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 RBMS3Q6XE24 437 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 C17orf107Q6ZR85 190 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 C3orf62Q6ZUJ4 267 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RHOUQ7L0Q8 258 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 AAED1Q7RTV5 226 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MISPQ8IVT2 679 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SAMD14Q8IZD0 417 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 RIBC1Q8N443 379 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 C17orf78Q8N4C9 275 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 OR9K2Q8NGE7 335 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 OR6Y1Q8NGX8 325 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 OR5W2Q8NH69 310 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ZFP28Q8NHY6 868 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RHEBL1Q8TAI7 183 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 NANPQ8TBE9 248 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 METTL6Q8TCB7 284 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MRAPQ8TCY5 172 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ACTRT1Q8TDG2 376 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 GATAD2BQ8WXI9 593 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 TMIGD2Q96BF3 282 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 PPCDCQ96CD2 204 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 LRRC58Q96CX6 371 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 FAM120BQ96EK7 910 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 MUS81Q96NY9 551 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 GAL3ST1Q99999 423 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RBM4BQ9BQ04 359 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 GATA5Q9BWX5 397 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 BTBD2Q9BX70 525 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RACGAP1Q9H0H5 632 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MMP27Q9H306 513 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 TOR3AQ9H497 397 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 OXSMQ9NWU1 459 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ADPRHL2Q9NX46 363 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 DCAF16Q9NXF7 216 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 GAR1Q9NY12 217 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 GRHL1Q9NZI5 618 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SH3BP4Q9P0V3 963 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SEC14L4Q9UDX3 406 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CHRNA9Q9UGM1 479 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 KCNE5Q9UJ90 142 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MID2Q9UJV3 735 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MKLN1Q9UL63 735 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SNX12Q9UMY4 172 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RCE1Q9Y256 329 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SLC9A8Q9Y2E8 581 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 WIPI2Q9Y4P8 454 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 PKD1L1Q8TDX9 2849 aa3.09□□□□□ -1.92
USP46-205ENST00000504078 VWFP04275 2813 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 TRIM49D1C9J1S8 452 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 POC1B-GALNT4F8VUJ3 575 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 NPIPB9F8W1W9 429 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 H3BNH8 94 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 M0QZ24 198 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 GPR171O14626 319 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 PIP5K1BO14986 540 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 HOXA3O43365 443 aaPredicted RBP3.08□□□□□ -1.92
USP46-205ENST00000504078 RAD51CO43502 376 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 SYNGR3O43761 229 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 SCN2BO60939 215 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 ULK1O75385 1050 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 CRCPO75575 148 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 RSL1D1O76021 490 aaKnown RBP3.08□□□□□ -1.92
USP46-205ENST00000504078 PMS2P2O95744 297 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 C6orf47O95873 294 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 CLPTM1O96005 669 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 PLATP00750 562 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 IGLV1-44P01699 117 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 HLA-HP01893 362 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 C1QCP02747 245 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 DBHP09172 617 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 PATE4P0C8F1 98 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 CCL2P13500 99 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 HSD3B1P14060 373 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 SDC1P18827 310 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 CBLP22681 906 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 GCH1P30793 250 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 HSD17B3P37058 310 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 MAP3K8P41279 467 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 RAD52P43351 418 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 SLC16A1P53985 500 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 PLTPP55058 493 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 ARF1P84077 181 aaKnown RBP3.08□□□□□ -1.92
USP46-205ENST00000504078 MYBPC1Q00872 1141 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 GUCY2DQ02846 1103 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 TGFBR3Q03167 851 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 PIGFQ07326 219 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 FUT5Q11128 374 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 BNIP2Q12982 314 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 CEACAM7Q14002 265 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 MAPK14Q16539 360 aa3.08□□□□□ -1.92
USP46-205ENST00000504078 TSTQ16762 297 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms