RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 RFX4Q33E94 735 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 ZNF546Q86UE3 836 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 ECHDC2Q86YB7 292 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 OR4F15Q8NGB8 312 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 TRMT10AQ8TBZ6 339 aaKnown RBP2.4□□□□□ -2.03
SUB1-204ENST00000504016 ZNF596Q8TC21 504 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 GIMAP1Q8WWP7 306 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 FAM210BQ96KR6 192 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 OXGR1Q96P68 337 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 ZNF607Q96SK3 696 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 TMEM246Q9BRR3 403 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 RAB34Q9BZG1 259 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 LRRN3Q9H3W5 708 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 SRMSQ9H3Y6 488 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 SLCO1B3Q9NPD5 702 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 DMAP1Q9NPF5 467 aaPredicted RBP2.4□□□□□ -2.03
SUB1-204ENST00000504016 PTBP2Q9UKA9 531 aaKnown RBP2.4□□□□□ -2.03
SUB1-204ENST00000504016 KIF16BQ96L93 1317 aa2.4□□□□□ -2.03
SUB1-204ENST00000504016 TCP11X1B4DZS4 312 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 C12orf77C9JDV5 145 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 LOC110117498-PIK3R3F6TDL0 507 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 MED7O43513 233 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 CD5LO43866 347 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 TBX19O60806 448 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 SS18L1O75177 396 aaPredicted RBP2.39□□□□□ -2.03
SUB1-204ENST00000504016 SPAG7O75391 227 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 GUCA1CO95843 209 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 IGHG4P01861 327 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 ALDOBP05062 364 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 IQCF3P0C7M6 154 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 HSMCR30P0CW71 290 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 RPL13AP40429 203 aaKnown RBP2.39□□□□□ -2.03
SUB1-204ENST00000504016 ACAA2P42765 397 aaKnown RBP2.39□□□□□ -2.03
SUB1-204ENST00000504016 CXCL5P42830 114 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 EIF4EBP1Q13541 118 aaPredicted RBP2.39□□□□□ -2.03
SUB1-204ENST00000504016 VGLL4Q14135 290 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 KCTD19Q17RG1 926 aaPredicted RBP2.39□□□□□ -2.03
SUB1-204ENST00000504016 TMEM183BQ1AE95 376 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 TMEM225Q6GV28 225 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 SLC25A24Q6NUK1 477 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 VSTM4Q8IW00 320 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 TMEM183AQ8IXX5 376 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 ZNF683Q8IZ20 524 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 STARD8Q92502 1023 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 UFD1Q92890 307 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 UBE2E3Q969T4 207 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 DNAJC19Q96DA6 116 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 SENP8Q96LD8 212 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 CLCC1Q96S66 551 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 TPK1Q9H3S4 243 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 PCYOX1Q9UHG3 505 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 SH3BGRL2Q9UJC5 107 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 TMCO1Q9UM00 188 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 POLDIP2Q9Y2S7 368 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 ARID1AO14497 2285 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 ASTN1O14525 1302 aa2.39□□□□□ -2.03
SUB1-204ENST00000504016 RPAP1Q9BWH6 1393 aaPredicted RBP2.38□□□□□ -2.03
SUB1-204ENST00000504016 ARHGAP21Q5T5U3 1957 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 CIB4A0PJX0 185 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 ARPC3O15145 178 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 TOM1O60784 492 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 TDGF1P13385 188 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 HPGDP15428 266 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 TDGF1P3P51864 188 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 CYTH1Q15438 398 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 LINC00483Q53H64 154 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 ZNF561Q8N587 486 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 CYB561D1Q8N8Q1 229 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 OR2T3Q8NH03 318 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 FAM110BQ8TC76 370 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 SLC22A8Q8TCC7 542 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 MCOLN3Q8TDD5 553 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 CXorf40BQ96DE9 158 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 SLC38A2Q96QD8 506 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 TAAR1Q96RJ0 339 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 CAPS2Q9BXY5 557 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 DNTTIP1Q9H147 329 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 IFI27L2Q9H2X8 130 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 NHEJ1Q9H9Q4 299 aaPredicted RBP2.38□□□□□ -2.03
SUB1-204ENST00000504016 UFSP2Q9NUQ7 469 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 NECAP2Q9NVZ3 263 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 ZNF226Q9NYT6 803 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 PIPOXQ9P0Z9 390 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 ISY1Q9ULR0 285 aaKnown RBP2.38□□□□□ -2.03
SUB1-204ENST00000504016 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SUB1-204ENST00000504016 C12orf71A8MTZ7 269 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 HSD17B6O14756 317 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 NOL3O60936 208 aaKnown RBP2.37□□□□□ -2.03
SUB1-204ENST00000504016 POU2F1P14859 743 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 CALRP27797 417 aaKnown RBP2.37□□□□□ -2.03
SUB1-204ENST00000504016 CCR1P32246 355 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 ZNF136P52737 540 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 ASPHQ12797 758 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 SMARCB1Q12824 385 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 MESDQ14696 234 aa2.37□□□□□ -2.03
SUB1-204ENST00000504016 GANABQ14697 944 aaKnown RBP2.37□□□□□ -2.03
SUB1-204ENST00000504016 DPYSL2Q16555 572 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms