RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RNASEKQ6P5S7 137 aaKnown RBP4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 DNM1P46Q6ZS02 220 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CADM2Q8N3J6 435 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CEP112Q8N8E3 955 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR2L3Q8NG85 312 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR56B4Q8NH76 319 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 HAVCR1Q96D42 359 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 IFT74Q96LB3 600 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 C12orf42Q96LP6 360 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 NOL4LQ96MY1 436 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 TBX15Q96SF7 602 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 FMO2Q99518 471 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 NIPAL2Q9H841 368 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 NMRAL1Q9HBL8 299 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 NT5MQ9NPB1 228 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PAK5Q9P286 719 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLC7A8Q9UHI5 535 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 RSPH14Q9UHP6 348 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PEX16Q9Y5Y5 336 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 COL5A2P05997 1499 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 BRD4O60885 1362 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 SRRM5B3KS81 715 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 DNALI1O14645 258 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 RNF13O43567 381 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 ZNF254O75437 659 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLITRK3O94933 977 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 CST1P01037 141 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 GAPDHP04406 335 aaKnown RBP4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 ZNF853P0CG23 659 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 VDAC1P21796 283 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 CALCRP30988 508 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 OPRD1P41143 372 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 PTGDSP41222 190 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 LMO4P61968 165 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 TGM3Q08188 693 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 GRB7Q14451 532 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 OXA1LQ15070 435 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 HIGD2BQ4VC39 106 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 TMEM107Q6UX40 140 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 C17orf82Q86X59 251 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 NRMQ8IXM6 262 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 SDR9C7Q8NEX9 313 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR1L6Q8NGR2 347 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR2L2Q8NH16 312 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 FAM110BQ8TC76 370 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 SEC22AQ96IW7 307 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 C1orf147Q96MC9 270 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 SRXN1Q9BYN0 137 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 NMUR2Q9GZQ4 415 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 PPA2Q9H2U2 334 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 TMCO1Q9UM00 188 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 CHD4Q14839 1912 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 NFAT5O94916 1531 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 BTAF1O14981 1849 aa4.05□□□□□ -1.76
HMGB1P3-201ENST00000502802 CRB1P82279 1406 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 CPSF1Q10570 1443 aaKnown RBP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 CASZ1Q86V15 1759 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 RALGAPA1Q6GYQ0 2036 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 TTC21BQ7Z4L5 1316 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 EVC2Q86UK5 1308 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 A0A087WWV3 80 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 ABCD4O14678 606 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 CACNG3O60359 315 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 ZNF354AO60765 605 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 OXSR1O95747 527 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 IGLL1P15814 213 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 PLP1P60201 277 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 ZNF77Q15935 545 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 PRR4Q16378 134 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 ISXQ2M1V0 245 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 EIPR1Q53HC9 387 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 XKR7Q5GH72 579 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 LRRC66Q68CR7 880 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 MAPK1IP1LQ8NDC0 245 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 UFD1Q92890 307 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 ZNF641Q96N77 438 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 CNN2Q99439 309 aaKnown RBP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 MAPKAP1Q9BPZ7 522 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 RBKSQ9H477 322 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 NARFLQ9H6Q4 476 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 NEK6Q9HC98 313 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 CSDC2Q9Y534 153 aaKnown RBP4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 TUBGCP6Q96RT7 1819 aa4.04□□□□□ -1.76
HMGB1P3-201ENST00000502802 CACNA1FO60840 1977 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 ROCK2O75116 1388 aaKnown RBP4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 MAP2P11137 1827 aaKnown RBP4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 CCDC182A6NF36 153 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 LRRIQ4A6NIV6 560 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 HIP1O00291 1037 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 HSD17B6O14756 317 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 UGT1A9O60656 530 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 KRT14P02533 472 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 TNNI1P19237 187 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 DDOSTP39656 456 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 CCDC173Q0VFZ6 552 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 ARL6IP1Q15041 203 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 AANATQ16613 207 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 CARD16Q5EG05 197 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 RAET1LQ5VY80 246 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms