RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 HCN3Q9P1Z3 774 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MBD2Q9UBB5 411 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SEC14L4Q9UDX3 406 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZNF222Q9UK12 451 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 NXT1Q9UKK6 140 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 IKZF3Q9UKT9 509 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 EXO1Q9UQ84 846 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 MEMO1Q9Y316 297 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SAMHD1Q9Y3Z3 626 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 NCOA6Q14686 2063 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 PRRC2AP48634 2157 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 NSG1A0A0A6YYJ2 146 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 A0A1B0GX78 115 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 A0A1W2PPH5 198 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TMEM82A0PJX8 343 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MYO1GB0I1T2 1018 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ISM1B1AKI9 464 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 M0R233 179 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SLC28A1O00337 649 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SGCEO43556 437 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 LANCL1O43813 399 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 OR1I1O60431 355 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TPST2O60704 377 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 APOL3O95236 402 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 PRAMEF1O95521 474 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HPP00738 406 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 IL1AP01583 271 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 IFNA4P05014 189 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MMP2P08253 660 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SULT1A3P0DMM9 295 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SULT1A4P0DMN0 295 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HOXB9P17482 250 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 FDXRP22570 491 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 STOMP27105 288 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CALCRP30988 508 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 NSG1P42857 185 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 KCNJ5P48544 419 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZP1P60852 638 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MXD1Q05195 221 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 LTBQ06643 244 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.11□□□□□ -1.75
MATR3-202ENST00000502422 LCP2Q13094 533 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SLBPQ14493 270 aaKnown RBP eCLIP4.11□□□□□ -1.75
MATR3-202ENST00000502422 OPCMLQ14982 345 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CDSNQ15517 529 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CEBPEQ15744 281 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 PFKFB4Q16877 469 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MICBQ29980 383 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FBXO48Q5FWF7 155 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 GPRC6AQ5T6X5 926 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CD276Q5ZPR3 534 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TRIQKQ629K1 86 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 RAB12Q6IQ22 244 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CDPF1Q6NVV7 123 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CNIH2Q6PI25 160 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 RASSF6Q6ZTQ3 369 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SHFQ7M4L6 423 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TSEN54Q7Z6J9 526 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 C19orf18Q8NEA5 215 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 OR52E1Q8NGJ3 308 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 GOT1L1Q8NHS2 421 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 WDR20Q8TBZ3 569 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 BRIX1Q8TDN6 353 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 SLC13A3Q8WWT9 602 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SFXN2Q96NB2 322 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FOXC2Q99958 501 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CPPED1Q9BRF8 314 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 THUMPD3Q9BV44 507 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 TFB2MQ9H5Q4 396 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 XKR8Q9H6D3 395 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 EVA1AQ9H8M9 152 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 IL26Q9NPH9 171 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SEMA4BQ9NPR2 832 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 EQTNQ9NQ60 294 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 BIN3Q9NQY0 253 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 C1orf109Q9NX04 203 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 THUMPD1Q9NXG2 353 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 MS4A12Q9NXJ0 267 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MALT1Q9UDY8 824 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CLEC2DQ9UHP7 191 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 STUB1Q9UNE7 303 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 PLCL2Q9UPR0 1127 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ASB4Q9Y574 426 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 NPTNQ9Y639 398 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SESN1Q9Y6P5 492 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 A0A087WV62 115 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 SMIM30A4D0T7 59 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 A8MVJ9 347 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 H7C2Y5 167 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 GPR171O14626 319 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 PRRG2O14669 202 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 APOC3P02656 99 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 C1QCP02747 245 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 RLN2P04090 185 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 SMIM6P0DI80 62 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 HOXB6P17509 224 aaKnown RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 CXCL2P19875 107 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 DNASE1P24855 282 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms