RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 SLC40A1Q9NP59 571 aa1.32□□□□□ -2.2
TRBVA-201ENST00000498804 SEC14L3Q9UDX4 400 aa1.32□□□□□ -2.2
TRBVA-201ENST00000498804 SHANK1Q9Y566 2161 aa1.32□□□□□ -2.2
TRBVA-201ENST00000498804 LRP5LA4QPB2 252 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 ZNF705GA8MUZ8 300 aaPredicted RBP1.31□□□□□ -2.2
TRBVA-201ENST00000498804 CCER2I3L3R5 266 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 SCGB2A1O75556 95 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 PNMTP11086 282 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 GAP43P17677 238 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 CALCRP30988 508 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 YWHABP31946 246 aaKnown RBP1.31□□□□□ -2.2
TRBVA-201ENST00000498804 CA8P35219 290 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 GLP1RP43220 463 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 CACNG7P62955 275 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 PDZK1IP1Q13113 114 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 FZD2Q14332 565 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 SLC15A2Q16348 729 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 RFX4Q33E94 735 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 PARP15Q460N3 678 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 VAX1Q5SQQ9 334 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 Q6ZN92 141 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 ZNF546Q86UE3 836 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 TICAM2Q86XR7 235 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 UBALD2Q8IYN6 164 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 SLC38A6Q8IZM9 456 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 CCDC54Q8NEL0 328 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 STXBP6Q8NFX7 210 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 DNAJC19Q96DA6 116 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 TM4SF19Q96DZ7 209 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 OXGR1Q96P68 337 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 SECISBP2Q96T21 854 aaKnown RBP1.31□□□□□ -2.2
TRBVA-201ENST00000498804 CAPS2Q9BXY5 557 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 ULBP2Q9BZM5 246 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 ACTR6Q9GZN1 396 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 POLR1EQ9GZS1 481 aaKnown RBP1.31□□□□□ -2.2
TRBVA-201ENST00000498804 DBNDD1Q9H9R9 158 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 WFDC1Q9HC57 220 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 TBK1Q9UHD2 729 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 GGA2Q9UJY4 613 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 ZNF222Q9UK12 451 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 MEMO1Q9Y316 297 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 MFHAS1Q9Y4C4 1052 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 RFNGQ9Y644 331 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 YEATS2Q9ULM3 1422 aa1.31□□□□□ -2.2
TRBVA-201ENST00000498804 A0A1B0GVX0 72 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 BTN3A3O00478 584 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 COX5AP20674 150 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 RFC4P35249 363 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 MAP3K8P41279 467 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 UBE2AP49459 152 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 NCBP2P52298 156 aaKnown RBP eCLIP1.3□□□□□ -2.2
TRBVA-201ENST00000498804 GMFBP60983 142 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 IL1RL1Q01638 556 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 MEF2BQ02080 365 aaPredicted RBP1.3□□□□□ -2.2
TRBVA-201ENST00000498804 VGLL4Q14135 290 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 CYTH1Q15438 398 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 COX19Q49B96 90 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 OR52E8Q6IFG1 317 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 ZNF880Q6PDB4 577 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 NCCRP1Q6ZVX7 275 aaPredicted RBP1.3□□□□□ -2.2
TRBVA-201ENST00000498804 PGAP1Q75T13 922 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 NLRP9Q7RTR0 991 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 CLEC4FQ8N1N0 589 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 CLDN19Q8N6F1 224 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 OR1F12Q8NHA8 337 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 RAET1EQ8TD07 263 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 ACTRT1Q8TDG2 376 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 BMFQ96LC9 184 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 WFIKKN1Q96NZ8 548 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 KRT23Q9C075 422 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 ELOVL3Q9HB03 270 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 NOX3Q9HBY0 568 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 TM9SF3Q9HD45 589 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 TUBGCP6Q96RT7 1819 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 SF3B1O75533 1304 aaKnown RBP eCLIP1.3□□□□□ -2.2
TRBVA-201ENST00000498804 MN1Q10571 1320 aaPredicted RBP1.3□□□□□ -2.2
TRBVA-201ENST00000498804 DOCK8Q8NF50 2099 aa1.3□□□□□ -2.2
TRBVA-201ENST00000498804 IGLV3-22A0A075B6J6 115 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 IGKV3D-11A0A0A0MRZ8 115 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 C7orf66A4D0T2 115 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PEX7O00628 323 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PRPSAP2O60256 369 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 UGT1A9O60656 530 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PFKFB2O60825 505 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 LRATO95237 230 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 IGHV3-43DP0DP04 118 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 HPGDP15428 266 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PGAM1P18669 254 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 CMA1P23946 247 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PSMA2P25787 234 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 CCND2P30279 289 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 DDOSTP39656 456 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 CASP4P49662 377 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 IRX3P78415 501 aaPredicted RBP1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PDIA2Q13087 525 aaKnown RBP1.29□□□□□ -2.2
TRBVA-201ENST00000498804 TMEM41BQ5BJD5 291 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 LINC00173Q6ZV60 143 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 MOB3BQ86TA1 216 aa1.29□□□□□ -2.2
TRBVA-201ENST00000498804 PGAM4Q8N0Y7 254 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms