RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 BATF3Q9NR55 127 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 SIRT3Q9NTG7 399 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CBLN4Q9NTU7 201 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 PSMC3IPQ9P2W1 217 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 MKLN1Q9UL63 735 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 FAF1Q9UNN5 650 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 LINC00854A0A1B0GVQ3 168 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 OR5H1A6NKK0 313 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 NPIPB8E9PQR5 432 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 COPEO14579 308 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 KLF11O14901 512 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 LSM1O15116 133 aaKnown RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SCAMP2O15127 329 aaKnown RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PLIN3O60664 434 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 FCMRO60667 390 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CYTIPO60759 359 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 TBX19O60806 448 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CPSF4O95639 269 aaKnown RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CHEK2O96017 543 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SHBGP04278 402 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CHRNGP07510 517 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ABHD2P08910 425 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 UBTFL6P0CB48 400 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 DHRS4L1P0CG22 281 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 HKR1P10072 659 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 BCKDHAP12694 445 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 MATN1P21941 496 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PRPH2P23942 346 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PTAFRP25105 342 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CD40P25942 277 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 HPCAL1P37235 193 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 FRKP42685 505 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 DIO1P49895 249 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 OR2B6P58173 313 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SRSF4Q08170 494 aaKnown RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 FOXL1Q12952 345 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PDE7AQ13946 482 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PTGR1Q14914 329 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 MLC1Q15049 377 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 WHAMMP3Q1A5X7 153 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PGS1Q32NB8 556 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 IQCCQ4KMZ1 466 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 KLHL26Q53HC5 615 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ARL13AQ5H913 290 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 VAX1Q5SQQ9 334 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 TIMM23BQ5SRD1 257 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 FBXW9Q5XUX1 488 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 C3orf33Q6P1S2 294 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ZCCHC12Q6PEW1 402 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 KLHL17Q6TDP4 642 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CASP12Q6UXS9 341 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ZCCHC23Q6ZST2 131 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 R3HCC1LQ7Z5L2 792 aaKnown RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 C10orf107Q8IVU9 208 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CCDC103Q8IW40 242 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 C10orf67Q8IYJ2 551 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SLC7A5P1Q8MH63 180 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SVOPLQ8N434 492 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 KRTCAP2Q8N6L1 136 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 LINC00469Q8N7U9 141 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 OR56A1Q8NGH5 318 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 OR5W2Q8NH69 310 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 KIF18AQ8NI77 898 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF563Q8TA94 476 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF418Q8TF45 676 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 TWIST2Q8WVJ9 160 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 UBLCP1Q8WVY7 318 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 TAF15Q92804 592 aaKnown RBP eCLIP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 APH1AQ96BI3 265 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CCDC126Q96EE4 140 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ARL5BQ96KC2 179 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 FCRL1Q96LA6 429 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 MRGPRX4Q96LA9 322 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PPP1R36Q96LQ0 422 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 FOXN4Q96NZ1 517 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 STACQ99469 402 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SDF2Q99470 211 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CCT7Q99832 543 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 VRK1Q99986 396 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 RHOXF2Q9BQY4 288 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 OR11A1Q9GZK7 315 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 HOXD1Q9GZZ0 328 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 CTPS2Q9NRF8 586 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 DUSP22Q9NRW4 184 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SERINC1Q9NRX5 453 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ACSS1Q9NUB1 689 aaPredicted RBP4.81□□□□□ -1.64
SPTA1-209ENST00000498708 OXSMQ9NWU1 459 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 UBAP1Q9NZ09 502 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 UPB1Q9UBR1 384 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 KCNE5Q9UJ90 142 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 MOKQ9UQ07 419 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 PRELID1Q9Y255 219 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 DTNAQ9Y4J8 743 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 DNAJC15Q9Y5T4 150 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 SLC25A15Q9Y619 301 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 ARFGEF3Q5TH69 2177 aa4.81□□□□□ -1.64
SPTA1-209ENST00000498708 HERC2O95714 4834 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms