RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	TMCC2	O75069	709 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	GMNN	O75496	209 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	DCTN3	O75935	186 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ATE1	O95260	518 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	IGHV3-9	P01782	118 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	CD3E	P07766	207 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	GRPR	P30550	384 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	NTF4	P34130	210 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ART1	P52961	327 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	TAS2R41	P59536	307 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	SELENOW	P63302	87 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	LIPE	Q05469	1076 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	TSC22D1	Q15714	1073 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	NPTX1	Q15818	432 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	STK11	Q15831	433 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ACKR1	Q16570	336 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	LRRC23	Q53EV4	343 aa	Predicted RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	CYBRD1	Q53TN4	286 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	TSPO2	Q5TGU0	170 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	KLHL17	Q6TDP4	642 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ZNF704	Q6ZNC4	412 aa	Predicted RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	C22orf34	Q6ZV56	151 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	CARM1	Q86X55	608 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	C10orf53	Q8N6V4	93 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ZIC4	Q8N9L1	334 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	NRGN	Q92686	78 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	SLC41A3	Q96GZ6	507 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	RADIL	Q96JH8	1075 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ZNF385A	Q96PM9	386 aa	Known RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	PIP5K1A	Q99755	562 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	LINC00470	Q9BZP3	86 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	MOV10	Q9HCE1	1003 aa	Known RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	SPAG4	Q9NPE6	437 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	OBP2B	Q9NPH6	170 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	CCM2L	Q9NUG4	571 aa	Predicted RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	BEX4	Q9NWD9	120 aa	Predicted RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	CMTM6	Q9NX76	183 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	NDE1	Q9NXR1	346 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	MRPL39	Q9NYK5	338 aa	Known RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	ARL2BP	Q9Y2Y0	163 aa		9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	MAGED1	Q9Y5V3	778 aa	Predicted RBP	9.27	□□□□□ -0.93
FXR1-222	ENST00000498658	AKAP6	Q13023	2319 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	HTR3E	A5X5Y0	456 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	ZNF587B	E7ETH6	402 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658		M0R082	166 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	PDLIM1	O00151	329 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	SIAH2	O43255	324 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	SLC43A1	O75387	559 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	RAD51D	O75771	328 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	OR5F1	O95221	314 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	OR6A2	O95222	327 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	WNT11	O96014	354 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	IGF2	P01344	180 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	HIST1H2AB	P04908	130 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	EDNRA	P25101	427 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	RBM34	P42696	430 aa	Known RBP	9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	MNAT1	P51948	309 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	SLC7A2	P52569	658 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	CRYBA2	P53672	197 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	SH3BGR	P55822	239 aa	Predicted RBP	9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	IL1RL1	Q01638	556 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	PMS2P3	Q13401	168 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	TESK1	Q15569	626 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	GABRA6	Q16445	453 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	DEFB113	Q30KQ7	82 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	NCMAP	Q5T1S8	102 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	ALKBH2	Q6NS38	261 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	C8orf82	Q6P1X6	216 aa	Predicted RBP	9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	NIPAL3	Q6P499	406 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	KLHL24	Q6TFL4	600 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	TMEM108	Q6UXF1	575 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	HIST3H2A	Q7L7L0	130 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	PIGW	Q7Z7B1	504 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	TREML1	Q86YW5	311 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	EPHX4	Q8IUS5	362 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	LURAP1L	Q8IV03	231 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	UEVLD	Q8IX04	471 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	PIK3C3	Q8NEB9	887 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	ZNF417	Q8TAU3	575 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	HIST1H2AC	Q93077	130 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	BOD1	Q96IK1	185 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	TPD52L3	Q96J77	140 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	HS6ST2	Q96MM7	605 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	KCTD14	Q9BQ13	255 aa	Predicted RBP	9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	WFDC6	Q9BQY6	131 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	TMEM204	Q9BSN7	226 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	AMBRA1	Q9C0C7	1298 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	CXXC4	Q9H2H0	198 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	LIME1	Q9H400	295 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	FKRP	Q9H9S5	495 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	SLC7A10	Q9NS82	523 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	SLC7A7	Q9UM01	511 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	MGAT4B	Q9UQ53	548 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	AMDHD2	Q9Y303	409 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	RNF115	Q9Y4L5	304 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658	NOX1	Q9Y5S8	564 aa		9.26	□□□□□ -0.93
FXR1-222	ENST00000498658		A0A1W2PPR1	153 aa		9.25	□□□□□ -0.93
FXR1-222	ENST00000498658	BGLAP	P02818	100 aa		9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms