RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CCDC115Q96NT0 180 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 MTHFD2LQ9H903 347 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-212ENST00000498540 RASD1Q9Y272 281 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 SPEF1Q9Y4P9 236 aa12.67□□□□□ -0.38
TRAF4-212ENST00000498540 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 RPL36A-HNRNPH2H7BZ11 118 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 WNT9BO14905 357 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 ITM2AO43736 263 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 NPIPB7O75200 414 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 SEC14L2O76054 403 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF432O94892 652 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 BPGMP07738 259 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 NUDT17P0C025 328 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 NR2F1P10589 423 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 PNMTP11086 282 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 PRG2P13727 222 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 ARR3P36575 388 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 CDKN2CP42773 168 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 WBP2NLQ6ICG8 309 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF781Q8N8C0 355 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 PNPT1Q8TCS8 783 aaKnown RBP12.66□□□□□ -0.38
TRAF4-212ENST00000498540 TEX37Q96LM6 180 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 MRPL37Q9BZE1 423 aaKnown RBP12.66□□□□□ -0.38
TRAF4-212ENST00000498540 CRLF2Q9HC73 371 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 GPR35Q9HC97 309 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 SEC14L4Q9UDX3 406 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 BTNL2Q9UIR0 455 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
TRAF4-212ENST00000498540 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 CCDC154A6NI56 674 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 E9PBE3 544 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 HPXP02790 462 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 MSMBP08118 114 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 TFPTP0C1Z6 253 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 SAGP10523 405 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 CREB1P16220 341 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 TCN1P20061 433 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 COL8A2P25067 703 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 S100A3P33764 101 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 GPR6P46095 362 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 CAPZA2P47755 286 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 DPY19L1Q2PZI1 675 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 CEACAM16Q2WEN9 425 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 PEX5LQ8IYB4 626 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 ANKK1Q8NFD2 765 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 ZNF418Q8TF45 676 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 GCDHQ92947 438 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 MRPL24Q96A35 216 aaKnown RBP12.65□□□□□ -0.38
TRAF4-212ENST00000498540 SLC25A36Q96CQ1 311 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 LRRC37BQ96QE4 947 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 PTDSS2Q9BVG9 487 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 RACGAP1Q9H0H5 632 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 B3GAT1Q9P2W7 334 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 RCE1Q9Y256 329 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 GRIP1Q9Y3R0 1128 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 PKD1L1Q8TDX9 2849 aa12.65□□□□□ -0.38
TRAF4-212ENST00000498540 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 M0R233 179 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 SYNGR3O43761 229 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 SLC43A1O75387 559 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 AHSA1O95433 338 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 GSNP06396 782 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 NR4A1P22736 598 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 ALDH3B1P43353 468 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 RPS5P46782 204 aaKnown RBP12.64□□□□□ -0.39
TRAF4-212ENST00000498540 CLNS1AP54105 237 aaKnown RBP12.64□□□□□ -0.39
TRAF4-212ENST00000498540 NME5P56597 212 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 HILS1P60008 231 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 COPZ1P61923 177 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 ATG16L1Q676U5 607 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 PEG10Q86TG7 708 aaKnown RBP12.64□□□□□ -0.39
TRAF4-212ENST00000498540 CLIP4Q8N3C7 705 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 GPR137CQ8N3F9 429 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 OR52P1PQ8NH57 321 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 MFSD8Q8NHS3 518 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 FAM216AQ8WUB2 273 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 MS4A3Q96HJ5 214 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 PKNOX2Q96KN3 472 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 PANX1Q96RD7 426 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 SYT3Q9BQG1 590 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 TREM2Q9NZC2 230 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 REV1Q9UBZ9 1251 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 PCDHB10Q9UN67 800 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 USP22Q9UPT9 525 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 CHST2Q9Y4C5 530 aa12.64□□□□□ -0.39
TRAF4-212ENST00000498540 A0A096LPI6 279 aa12.63□□□□□ -0.39
TRAF4-212ENST00000498540 HLA-HP01893 362 aa12.63□□□□□ -0.39
TRAF4-212ENST00000498540 TFP02787 698 aa12.63□□□□□ -0.39
TRAF4-212ENST00000498540 GAAP10253 952 aa12.63□□□□□ -0.39
TRAF4-212ENST00000498540 ZNF43P17038 809 aa12.63□□□□□ -0.39
TRAF4-212ENST00000498540 NCF2P19878 526 aaPredicted RBP12.63□□□□□ -0.39
TRAF4-212ENST00000498540 ETV4P43268 484 aa12.63□□□□□ -0.39
TRAF4-212ENST00000498540 ANXA11P50995 505 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms