RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 B3GAT1Q9P2W7 334 aa16.16■□□□□ 0.18
HOXD11-202ENST00000498438 ABCD4O14678 606 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 ARHGEF9O43307 516 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 ZNF83P51522 516 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 CRYBA2P53672 197 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 TGFBR3Q03167 851 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 ZNF613Q6PF04 617 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 CCDC80Q76M96 950 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 RBM45Q8IUH3 476 aaKnown RBP16.15■□□□□ 0.18
HOXD11-202ENST00000498438 C17orf78Q8N4C9 275 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 PCYOX1LQ8NBM8 494 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 OR4D11Q8NGI4 311 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 SLC26A7Q8TE54 656 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 ALKBH3Q96Q83 286 aaPredicted RBP16.15■□□□□ 0.18
HOXD11-202ENST00000498438 GSX2Q9BZM3 304 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 SLC17A5Q9NRA2 495 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 USP22Q9UPT9 525 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 LAMP3Q9UQV4 416 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 B3GALT5Q9Y2C3 310 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 ZFHX3Q15911 3703 aa16.15■□□□□ 0.18
HOXD11-202ENST00000498438 CPSF4LA6NMK7 179 aaKnown RBP16.14■□□□□ 0.17
HOXD11-202ENST00000498438 SHISA9B4DS77 424 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 ZNF587BE7ETH6 402 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 SLC22A2O15244 555 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 ATP8B1O43520 1251 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 KRT33AO76009 404 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 BGLAPP02818 100 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 ZNF43P17038 809 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 CDH2P19022 906 aaPredicted RBP16.14■□□□□ 0.17
HOXD11-202ENST00000498438 PTH2RP49190 550 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 CDH11P55287 796 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 CLDN17P56750 224 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 SLC25A3Q00325 362 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 IL1RL1Q01638 556 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 ENTPD8Q5MY95 495 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 KLHL17Q6TDP4 642 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 H1FNTQ75WM6 255 aaPredicted RBP16.14■□□□□ 0.17
HOXD11-202ENST00000498438 ABHD12BQ7Z5M8 362 aaPredicted RBP16.14■□□□□ 0.17
HOXD11-202ENST00000498438 POU5F2Q8N7G0 328 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 WDR31Q8NA23 367 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 ADPRHL1Q8NDY3 354 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 OR6S1Q8NH40 331 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 RCN3Q96D15 328 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 OXGR1Q96P68 337 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 TMEM43Q9BTV4 400 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 CXorf56Q9H5V9 222 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 GID8Q9NWU2 228 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 AMDHD2Q9Y303 409 aa16.14■□□□□ 0.17
HOXD11-202ENST00000498438 OR6C65A6NJZ3 312 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 M0R1B8 84 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 CHP2O43745 196 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 LTBQ06643 244 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 SPOCK1Q08629 439 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 C1DQ13901 141 aaKnown RBP16.13■□□□□ 0.17
HOXD11-202ENST00000498438 MFSD13AQ14CX5 517 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 ERICH5Q6P6B1 374 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 TMEM108Q6UXF1 575 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 LINGO2Q7L985 606 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 YTHDF3Q7Z739 585 aaKnown RBP16.13■□□□□ 0.17
HOXD11-202ENST00000498438 TSPYL5Q86VY4 417 aaPredicted RBP16.13■□□□□ 0.17
HOXD11-202ENST00000498438 ADAMTS16Q8TE57 1224 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 RASSF5Q8WWW0 418 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 SLC41A3Q96GZ6 507 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 ZNF583Q96ND8 569 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 MOGAT1Q96PD6 335 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 C1QTNF6Q9BXI9 259 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 RCE1Q9Y256 329 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 CORINQ9Y5Q5 1042 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 ALPK2Q86TB3 2170 aa16.13■□□□□ 0.17
HOXD11-202ENST00000498438 HEATR1Q9H583 2144 aaKnown RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 FAM220BPB1ANY3 271 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 LRRN3E7EW58 273 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 TMCC2O75069 709 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 UPK3AO75631 287 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 ZNF432O94892 652 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 LYPD3O95274 346 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 HPRP00739 348 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 THY1P04216 161 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 SOD3P08294 240 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 DANCRP0C864 163 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 NQO1P15559 274 aaKnown RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 PTAFRP25105 342 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 CD40P25942 277 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 RPS4XP62701 263 aaKnown RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 VEZF1Q14119 521 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 HIKESHIQ53FT3 197 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 WDR88Q6ZMY6 472 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 C10orf53Q8N6V4 93 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 SCAIQ8N9R8 606 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 SMAP2Q8WU79 429 aaPredicted RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 ASPNQ9BXN1 380 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 LINC00470Q9BZP3 86 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 PCDHAC1Q9H158 963 aa16.12■□□□□ 0.17
HOXD11-202ENST00000498438 ZNF701Q9NV72 531 aaPredicted RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 MAGED1Q9Y5V3 778 aaPredicted RBP16.12■□□□□ 0.17
HOXD11-202ENST00000498438 TRAPPC13A5PLN9 417 aa16.11■□□□□ 0.17
HOXD11-202ENST00000498438 MS4A18H0YCH9 400 aa16.11■□□□□ 0.17
HOXD11-202ENST00000498438 TRAF3IP2O43734 574 aaPredicted RBP16.11■□□□□ 0.17
HOXD11-202ENST00000498438 SLC43A1O75387 559 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms