RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 Q96MT0 163 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 PITX2Q99697 317 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 NIPSNAP1Q9BPW8 284 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 FUZQ9BT04 418 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 DEFB126Q9BYW3 111 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 B3GNT4Q9C0J1 378 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 HHATLQ9HCP6 504 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 EXOSC3Q9NQT5 275 aaKnown RBP4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 IMPAD1Q9NX62 359 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 GALNT8Q9NY28 637 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 PISDQ9UG56 409 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC7A7Q9UM01 511 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM5Q9Y2B1 443 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 PCDHGA3Q9Y5H0 932 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 SNX5Q9Y5X3 404 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 MTORP42345 2549 aa4.82□□□□□ -1.64
HMGXB4-208ENST00000498325 IGHV3-20A0A0C4DH32 117 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A0G2JNJ9 132 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 TRBV11-1A0A0K0K1C0 115 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 OR6C70A6NIJ9 312 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZAR1LA6NP61 321 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CDRT15L2A8MXV6 281 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 FAM47E-STBD1D6RA91 191 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 E9PQ18 207 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF701M0R085 212 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PLD2O14939 933 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 EIF4E2O60573 245 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 MRPS14O60783 128 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CNOT3O75175 753 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 RCBTB2O95199 551 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ANGPTL1O95841 491 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PNMTP11086 282 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 UBL4AP11441 157 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PRG2P13727 222 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ATP6V1B1P15313 513 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ITIH1P19827 911 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 TCN2P20062 427 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PGCP20142 388 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 MMP11P24347 488 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CHMP24386 653 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ABCD3P28288 659 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 TTKP33981 857 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 POLR2IP36954 125 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ETV5P41161 510 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 RBM34P42696 430 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 GSSP48637 474 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 IDH2P48735 452 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 HLCSP50747 726 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PSMD7P51665 324 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 SMSP52788 366 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 EFNA3P52797 238 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 MLLT10P55197 1068 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 HOXC5Q00444 222 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PRKCDQ05655 676 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 TMED1Q13445 227 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 MAD2L1BPQ15013 274 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ALG10BQ5I7T1 473 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 C3orf38Q5JPI3 329 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 WBP2NLQ6ICG8 309 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 LCN10Q6JVE6 187 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 RPL13AP3Q6NVV1 102 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF517Q6ZMY9 492 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 RASSF6Q6ZTQ3 369 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PTCHD4Q6ZW05 846 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 MISPQ8IVT2 679 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 NKAIN4Q8IVV8 208 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PRR22Q8IZ63 422 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CADM2Q8N3J6 435 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ESX1Q8N693 406 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC15A4Q8N697 577 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CLDN22Q8N7P3 220 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF441Q8N8Z8 693 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 APCDD1LQ8NCL9 501 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 BPIFB6Q8NFQ5 453 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF563Q8TA94 476 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 TEX47Q8TBZ9 253 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 M1APQ8TC57 530 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 IPCEF1Q8WWN9 437 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 OSTF1Q92882 214 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF566Q969W8 418 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 NACC2Q96BF6 587 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 WDR77Q9BQA1 342 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PRSS27Q9BQR3 290 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 GPR87Q9BY21 358 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PRRG3Q9BZD7 231 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 TBL1XR1Q9BZK7 514 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 LAT2Q9GZY6 243 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF700Q9H0M5 742 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 AKIRIN1Q9H9L7 192 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 ZBTB20Q9HC78 741 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CCNB1IP1Q9NPC3 277 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 SDHAF3Q9NRP4 125 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 MAN2C1Q9NTJ4 1040 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PLCXD1Q9NUJ7 323 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 CLN6Q9NWW5 311 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 Q9UFV3 132 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 FARSAQ9Y285 508 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 NTNG1Q9Y2I2 539 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms