RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 C16orf52Q8NHV5 167 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 GATAD1Q8WUU5 269 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 TMED6Q8WW62 240 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ZNRF4Q8WWF5 429 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 HPSE2Q8WWQ2 592 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 TMEM143Q96AN5 459 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 LRRC45Q96CN5 670 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 DNAJA3Q96EY1 480 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 CPB2Q96IY4 423 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ATP5SQ99766 215 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 PELOQ9BRX2 385 aaKnown RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 SLC35A5Q9BS91 424 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ANGPTL4Q9BY76 406 aa5.16□□□□□ -1.58
BRCA1-224ENST00000497488 ARID1BQ8NFD5 2236 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-224ENST00000497488 C4BP0C0L5 1744 aa5.15□□□□□ -1.58
BRCA1-224ENST00000497488 SCN11AQ9UI33 1791 aa5.15□□□□□ -1.58
BRCA1-224ENST00000497488 GOLGA8RI6L899 631 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 K7ERI5 159 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 RFXANKO14593 260 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 SURF4O15260 269 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 CCNB2O95067 398 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 VAPBO95292 243 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 C1orf105O95561 183 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 HPP00738 406 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 HLA-HP01893 362 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 IFNW1P05000 195 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 NR2C1P13056 603 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF12P17014 697 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 PSMB6P28072 239 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 GABRR2P28476 465 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ETV5P41161 510 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 XCR1P46094 333 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TMED10P49755 219 aaKnown RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 PKNOX1P55347 436 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 CDR2Q01850 454 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TMEM187Q14656 261 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 EMC2Q15006 297 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 NDUFA9Q16795 377 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 GTDC1Q4AE62 458 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 EOGTQ5NDL2 527 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 WDR25Q64LD2 544 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 C8orf74Q6P047 294 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TPGS1Q6ZTW0 290 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ABHD12BQ7Z5M8 362 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 CCDC65Q8IXS2 484 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF100Q8IYN0 542 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 BPIFB2Q8N4F0 458 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 RNF10Q8N5U6 811 aaKnown RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TPRX1Q8N7U7 411 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ATP6V0D2Q8N8Y2 350 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF248Q8NDW4 579 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 OR9Q2Q8NGE9 314 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 OR52H1Q8NGJ2 320 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TBCKQ8TEA7 893 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 HTR3CQ8WXA8 447 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 FAF2Q96CS3 445 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ECHDC3Q96DC8 303 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ZBED6CLQ96FA7 236 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 C9orf72Q96LT7 481 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 FAM218AQ96MZ4 157 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 RNF2Q99496 336 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 NAPGQ99747 312 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF670Q9BS34 389 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 OPN3Q9H1Y3 402 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 IL25Q9H293 177 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 GAREM1Q9H706 876 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF334Q9HCZ1 680 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 PARD6AQ9NPB6 346 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 DMAP1Q9NPF5 467 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ESM1Q9NQ30 184 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 ADARB2Q9NS39 739 aaKnown RBP5.15□□□□□ -1.59
BRCA1-224ENST00000497488 INSL6Q9Y581 213 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TNFRSF18Q9Y5U5 241 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 MAP3K5Q99683 1374 aa5.15□□□□□ -1.59
BRCA1-224ENST00000497488 TAF1LQ8IZX4 1826 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 KCPQ6ZWJ8 1503 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 C1orf232A0A0U1RR37 186 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 A0A1W2PQ72 361 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ERVV-2B6SEH9 535 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 NARSO43776 548 aaKnown RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 CXCL13O43927 109 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 PRKNO60260 465 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 MYO1DO94832 1006 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 FARS2O95363 451 aaKnown RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 PAK4O96013 591 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TSHBP01222 138 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 PNMA6AP0CW24 399 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 DPEP1P16444 411 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF20P17024 532 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 CD40LGP29965 261 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 VHLP40337 213 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 SLC1A1P43005 524 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 PCYT1AP49585 367 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ATP12AP54707 1039 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 UCNP55089 124 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 RPL8P62917 257 aaKnown RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 SCRN3Q0VDG4 424 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 SLC39A6Q13433 755 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 GCKRQ14397 625 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms