RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 ADPRHL1Q8NDY3 354 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 INTS12Q96CB8 462 aaKnown RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 IMMP1LQ96LU5 166 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 CHCHD6Q9BRQ6 235 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 KCNG2Q9UJ96 466 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ENPP5Q9UJA9 477 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SDK1Q7Z5N4 2213 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 LRP4O75096 1905 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 H3BSA7 217 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 NADKO95544 446 aaPredicted RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 APOA1P02647 267 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 TFAP2AP05549 437 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 S100A1P23297 94 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 CSNK1A1P48729 337 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ZNF846Q147U1 533 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 OR5M10Q6IEU7 315 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 GPR137CQ8N3F9 429 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 GTPBP8Q8N3Z3 284 aaPredicted RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 GALNT16Q8N428 558 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ARIH2OSQ8N7S6 290 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SLC38A9Q8NBW4 561 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 C12orf43Q96C57 262 aaKnown RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 COG8Q96MW5 612 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ALG8Q9BVK2 526 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ADAM19Q9H013 955 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 RPRD1BQ9NQG5 326 aaKnown RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 HIF3AQ9Y2N7 669 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 TMEM72A0PK05 275 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 C12orf71A8MTZ7 269 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 J3QLW9 94 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 CASKO14936 926 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 TFECO14948 347 aaPredicted RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 CBFA2T3O75081 653 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ZNF19P17023 458 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 CD53P19397 219 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 EIF2S3P41091 472 aaKnown RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 ZNF829Q3KNS6 432 aaPredicted RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 ACSM5Q6NUN0 579 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 NIPAL3Q6P499 406 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SLCO6A1Q86UG4 719 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 OR13F1Q8NGS4 319 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 MCFD2Q8NI22 146 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 PAQR8Q8TEZ7 354 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ADAMTS14Q8WXS8 1223 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 OXGR1Q96P68 337 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 PRSS27Q9BQR3 290 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 MROQ9BYG7 248 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 ZFP64Q9NPA5 681 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 KCNE5Q9UJ90 142 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 TRAPPC4Q9Y296 219 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 TRAV17A0A0B4J275 112 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SLC43A1O75387 559 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 FCGR2AP12318 317 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 RORCP51449 518 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 POU3F1Q03052 451 aaPredicted RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 OR1C1Q15619 314 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 FCRLBQ6BAA4 426 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 PIP4P1Q86T03 277 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 OR2M3Q8NG83 312 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 FBLIM1Q8WUP2 373 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 LMF1Q96S06 567 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SIAEQ9HAT2 523 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 GNG8Q9UK08 70 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 M0R082 166 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 SOCS6O14544 535 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 SEC14L2O76054 403 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 PRKAR1AP10644 381 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 HOXC12P31275 282 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 SDC2P34741 201 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 CD97P48960 835 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 RIDAP52758 137 aaKnown RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 RPL18Q07020 188 aaKnown RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 CRMP1Q14194 572 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 EEF1A1P5Q5VTE0 462 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 HBMQ6B0K9 141 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 LINC00696Q6ZRV3 163 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 SLC35D2Q76EJ3 337 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 ZNF417Q8TAU3 575 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 LGALS12Q96DT0 336 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 ZNF587Q96SQ5 575 aaPredicted RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 TBX5Q99593 518 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 SRA1Q9HD15 236 aaKnown RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 IL20RAQ9UHF4 553 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 ZNF223Q9UK11 482 aaPredicted RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 DLGAP1O14490 977 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 RGS9O75916 674 aaPredicted RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 FOSL1P15407 271 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 CFL1P23528 166 aaKnown RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 CARD18P57730 90 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 RPS18P62269 152 aaKnown RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 WDR88Q6ZMY6 472 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 MEX3DQ86XN8 651 aaKnown RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 OR52I1Q8NGK6 324 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 THEM6Q8WUY1 208 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 C6orf62Q9GZU0 229 aaPredicted RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 DCSTAMPQ9H295 470 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 PLGRKTQ9HBL7 147 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 KNL1Q8NG31 2342 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 IGLV3-32A0A0A0MS00 114 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 A0A1W2PPL8 197 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms